Experiment: Anaerobic, acetate donor; nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0753 and Dsui_0754 are separated by 130 nucleotides Dsui_0754 and Dsui_0755 are separated by 133 nucleotides Dsui_0755 and Dsui_0756 are separated by 142 nucleotides Dsui_0756 and Dsui_0757 are separated by 43 nucleotides
Dsui_0753: Dsui_0753 - ATPase component of ABC transporters with duplicated ATPase domain, at 752,234 to 753,850
_0753
Dsui_0754: Dsui_0754 - hypothetical protein, at 753,981 to 754,355
_0754
Dsui_0755: Dsui_0755 - hypothetical protein, at 754,489 to 755,103
_0755
Dsui_0756: Dsui_0756 - hypothetical protein, at 755,246 to 755,941
_0756
Dsui_0757: Dsui_0757 - HD-GYP domain-containing protein, at 755,985 to 757,190
_0757
Position (kb) 754
755
756 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 753.559 kb on - strand, within Dsui_0753 at 753.559 kb on - strand, within Dsui_0753 at 753.693 kb on - strand at 753.703 kb on - strand at 753.704 kb on - strand at 753.714 kb on - strand at 753.727 kb on - strand at 754.005 kb on - strand at 754.016 kb on + strand at 754.030 kb on + strand, within Dsui_0754 at 754.030 kb on + strand, within Dsui_0754 at 754.036 kb on + strand, within Dsui_0754 at 754.084 kb on + strand, within Dsui_0754 at 754.084 kb on + strand, within Dsui_0754 at 754.085 kb on - strand at 754.100 kb on - strand, within Dsui_0754 at 754.100 kb on - strand, within Dsui_0754 at 754.122 kb on - strand, within Dsui_0754 at 754.185 kb on - strand, within Dsui_0754 at 754.226 kb on + strand, within Dsui_0754 at 754.272 kb on + strand, within Dsui_0754 at 754.346 kb on + strand at 754.365 kb on - strand at 754.421 kb on + strand at 754.438 kb on - strand at 754.458 kb on - strand at 754.492 kb on + strand at 754.493 kb on - strand at 754.500 kb on - strand at 754.500 kb on - strand at 754.549 kb on + strand at 754.549 kb on + strand at 754.583 kb on + strand, within Dsui_0755 at 754.583 kb on + strand, within Dsui_0755 at 754.589 kb on - strand, within Dsui_0755 at 754.589 kb on - strand, within Dsui_0755 at 754.591 kb on - strand, within Dsui_0755 at 754.591 kb on - strand, within Dsui_0755 at 754.602 kb on - strand, within Dsui_0755 at 754.638 kb on + strand, within Dsui_0755 at 754.648 kb on + strand, within Dsui_0755 at 754.655 kb on + strand, within Dsui_0755 at 754.655 kb on + strand, within Dsui_0755 at 754.663 kb on - strand, within Dsui_0755 at 754.781 kb on + strand, within Dsui_0755 at 754.789 kb on - strand, within Dsui_0755 at 754.832 kb on + strand, within Dsui_0755 at 754.832 kb on + strand, within Dsui_0755 at 754.840 kb on - strand, within Dsui_0755 at 754.840 kb on - strand, within Dsui_0755 at 754.857 kb on + strand, within Dsui_0755 at 754.936 kb on - strand, within Dsui_0755 at 754.938 kb on + strand, within Dsui_0755 at 755.007 kb on - strand, within Dsui_0755 at 755.080 kb on + strand at 755.098 kb on + strand at 755.098 kb on + strand at 755.103 kb on + strand at 755.103 kb on + strand at 755.103 kb on + strand at 755.103 kb on + strand at 755.188 kb on + strand at 755.204 kb on + strand at 755.261 kb on - strand at 755.276 kb on + strand at 755.328 kb on + strand at 755.435 kb on - strand, within Dsui_0756 at 755.450 kb on - strand, within Dsui_0756 at 755.532 kb on + strand, within Dsui_0756 at 755.532 kb on + strand, within Dsui_0756 at 755.540 kb on - strand, within Dsui_0756 at 755.540 kb on - strand, within Dsui_0756 at 755.672 kb on - strand, within Dsui_0756 at 755.712 kb on + strand, within Dsui_0756 at 755.769 kb on - strand, within Dsui_0756 at 755.796 kb on + strand, within Dsui_0756 at 755.817 kb on + strand at 755.826 kb on + strand, within Dsui_0756 at 755.973 kb on + strand at 755.981 kb on - strand at 756.016 kb on + strand at 756.059 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic, acetate donor; nitrate electron acceptor remove 753,559 - Dsui_0753 0.82 +0.9 753,559 - Dsui_0753 0.82 +0.8 753,693 - +1.2 753,703 - +2.9 753,704 - +2.5 753,714 - +0.9 753,727 - -2.3 754,005 - -0.7 754,016 + +0.6 754,030 + Dsui_0754 0.13 -2.6 754,030 + Dsui_0754 0.13 -1.1 754,036 + Dsui_0754 0.15 -1.5 754,084 + Dsui_0754 0.27 -1.3 754,084 + Dsui_0754 0.27 -1.1 754,085 - +0.2 754,100 - Dsui_0754 0.32 +0.6 754,100 - Dsui_0754 0.32 +0.4 754,122 - Dsui_0754 0.38 +0.5 754,185 - Dsui_0754 0.54 -0.6 754,226 + Dsui_0754 0.65 +0.9 754,272 + Dsui_0754 0.78 -2.6 754,346 + -0.8 754,365 - +0.3 754,421 + +0.6 754,438 - +1.1 754,458 - -1.4 754,492 + -2.3 754,493 - -0.0 754,500 - -0.6 754,500 - +0.9 754,549 + +0.9 754,549 + +0.4 754,583 + Dsui_0755 0.15 +2.9 754,583 + Dsui_0755 0.15 -1.3 754,589 - Dsui_0755 0.16 +0.3 754,589 - Dsui_0755 0.16 -0.2 754,591 - Dsui_0755 0.17 +0.2 754,591 - Dsui_0755 0.17 +3.5 754,602 - Dsui_0755 0.18 -2.0 754,638 + Dsui_0755 0.24 +0.6 754,648 + Dsui_0755 0.26 +2.9 754,655 + Dsui_0755 0.27 -0.0 754,655 + Dsui_0755 0.27 +0.0 754,663 - Dsui_0755 0.28 +0.9 754,781 + Dsui_0755 0.47 +0.1 754,789 - Dsui_0755 0.49 +0.9 754,832 + Dsui_0755 0.56 +1.2 754,832 + Dsui_0755 0.56 +0.8 754,840 - Dsui_0755 0.57 -0.4 754,840 - Dsui_0755 0.57 +0.7 754,857 + Dsui_0755 0.60 +0.6 754,936 - Dsui_0755 0.73 +2.9 754,938 + Dsui_0755 0.73 -0.2 755,007 - Dsui_0755 0.84 -0.5 755,080 + -2.8 755,098 + +1.5 755,098 + +3.5 755,103 + -1.0 755,103 + +0.0 755,103 + -1.0 755,103 + +0.6 755,188 + +1.2 755,204 + -0.6 755,261 - -0.3 755,276 + -0.7 755,328 + +0.3 755,435 - Dsui_0756 0.27 -1.3 755,450 - Dsui_0756 0.29 -0.1 755,532 + Dsui_0756 0.41 -0.0 755,532 + Dsui_0756 0.41 +0.2 755,540 - Dsui_0756 0.42 -0.5 755,540 - Dsui_0756 0.42 +0.8 755,672 - Dsui_0756 0.61 -1.0 755,712 + Dsui_0756 0.67 +0.9 755,769 - Dsui_0756 0.75 -0.4 755,796 + Dsui_0756 0.79 -0.1 755,817 + +0.9 755,826 + Dsui_0756 0.83 -1.1 755,973 + -1.1 755,981 - -0.8 756,016 + -0.3 756,059 - +1.5
Or see this region's nucleotide sequence