Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01180

Experiment: Growth in M5G

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth in M5G
1,298,024	-		CCNA_01178	0.76	-1.0
1,298,070	-		CCNA_01178	0.85	-2.5
1,298,090	+		CCNA_01178	0.89	-0.7
1,298,098	-				-2.7
1,298,105	+				-2.6
1,298,128	+				+0.4
1,298,128	+				-0.3
1,298,141	+				-3.2
1,298,150	+				-0.8
1,298,173	+				+2.1
1,298,173	+				-0.5
1,298,173	+				-2.9
1,298,188	-				-2.7
1,298,198	+				-4.0
1,298,208	+				+2.5
1,298,208	+				-3.3
1,298,240	-		CCNA_01179	0.13	-1.0
1,298,321	+		CCNA_01179	0.24	-3.0
1,298,333	-		CCNA_01179	0.25	-1.6
1,298,381	+		CCNA_01179	0.32	-2.9
1,298,407	+		CCNA_01179	0.36	-3.8
1,298,415	-		CCNA_01179	0.37	-2.8
1,298,419	-		CCNA_01179	0.37	+0.2
1,298,472	+		CCNA_01179	0.44	-1.2
1,298,472	+		CCNA_01179	0.44	-1.5
1,298,472	+		CCNA_01179	0.44	-3.5
1,298,480	-		CCNA_01179	0.45	-2.0
1,298,640	+		CCNA_01179	0.67	-1.9
1,298,682	-		CCNA_01179	0.73	-3.3
1,298,728	+		CCNA_01179	0.79	-3.2
1,298,736	-		CCNA_01179	0.80	-3.8
1,298,741	-		CCNA_01179	0.81	-1.7
1,298,750	+		CCNA_01179	0.82	-2.0
1,298,879	+				-0.5
1,298,893	+				+0.6
1,298,976	-				+0.2
1,298,981	-				-0.5
1,298,986	+				+1.5
1,298,988	+				-0.2
1,298,994	-				-0.2
1,299,021	-				+1.3
1,299,026	+				-1.2
1,299,026	+				+1.5
1,299,096	+				-1.0
1,299,103	-				-0.2
1,299,114	-				+0.7
1,299,180	-				-0.4
1,299,203	+				+0.3
1,299,204	-				-0.2
1,299,219	+				-2.1
1,299,219	+				-0.9
1,299,309	+		CCNA_01180	0.14	-1.2
1,299,373	-		CCNA_01180	0.17	-0.0
1,299,413	+		CCNA_01180	0.19	+0.6
1,299,465	+		CCNA_01180	0.21	+0.7
1,299,465	+		CCNA_01180	0.21	+1.7
1,299,472	+		CCNA_01180	0.21	+0.4
1,299,473	+		CCNA_01180	0.21	-0.1
1,299,480	+		CCNA_01180	0.22	+1.7
1,299,488	+		CCNA_01180	0.22	-0.4
1,299,496	-		CCNA_01180	0.22	+0.4
1,299,513	+		CCNA_01180	0.23	+0.4
1,299,513	+		CCNA_01180	0.23	-1.1
1,299,513	+		CCNA_01180	0.23	-2.0
1,299,521	-		CCNA_01180	0.24	-1.4
1,299,521	-		CCNA_01180	0.24	-0.0
1,299,521	-		CCNA_01180	0.24	-0.9
1,299,521	-		CCNA_01180	0.24	-1.2
1,299,521	-		CCNA_01180	0.24	-0.2
1,299,521	-		CCNA_01180	0.24	-0.2
1,299,524	+		CCNA_01180	0.24	-0.3
1,299,534	+		CCNA_01180	0.24	-0.1
1,299,534	+		CCNA_01180	0.24	-0.4
1,299,534	+		CCNA_01180	0.24	+0.2
1,299,534	+		CCNA_01180	0.24	+0.4
1,299,542	-		CCNA_01180	0.25	+1.0
1,299,542	-		CCNA_01180	0.25	+0.1
1,299,542	-		CCNA_01180	0.25	-1.6
1,299,542	-		CCNA_01180	0.25	-0.5
1,299,542	-		CCNA_01180	0.25	-1.0
1,299,542	-		CCNA_01180	0.25	-1.1
1,299,542	-		CCNA_01180	0.25	-1.5
1,299,618	+		CCNA_01180	0.28	-1.1
1,299,624	+		CCNA_01180	0.28	-2.0
1,299,629	+		CCNA_01180	0.29	+1.4
1,299,637	-		CCNA_01180	0.29	-0.2
1,299,700	+		CCNA_01180	0.32	+0.5
1,299,700	+		CCNA_01180	0.32	+1.3
1,299,700	+		CCNA_01180	0.32	+1.6
1,299,716	-		CCNA_01180	0.33	-0.1
1,299,725	-		CCNA_01180	0.33	-0.8
1,299,751	-		CCNA_01180	0.34	-1.2
1,299,843	-		CCNA_01180	0.38	+0.9
1,299,869	-		CCNA_01180	0.40	+0.1
1,299,928	-		CCNA_01180	0.42	-0.8
1,299,937	-		CCNA_01180	0.43	+1.2
1,299,937	-		CCNA_01180	0.43	+0.2
1,299,944	-		CCNA_01180	0.43	-0.6
1,299,956	-		CCNA_01180	0.44	+0.6
1,300,005	+		CCNA_01180	0.46	-1.2
1,300,009	-		CCNA_01180	0.46	-0.7
1,300,038	+		CCNA_01180	0.47	+0.8
1,300,040	-		CCNA_01180	0.47	-0.7
1,300,057	-		CCNA_01180	0.48	-1.0
1,300,057	-		CCNA_01180	0.48	+0.3
1,300,057	-		CCNA_01180	0.48	-0.1
1,300,091	-		CCNA_01180	0.50	-0.6
1,300,092	+		CCNA_01180	0.50	-1.8
1,300,139	+		CCNA_01180	0.52	-1.5
1,300,179	-		CCNA_01180	0.54	+0.1
1,300,187	-		CCNA_01180	0.54	+0.8
1,300,222	-		CCNA_01180	0.56	+0.1
1,300,291	+		CCNA_01180	0.59	+2.1
1,300,292	-		CCNA_01180	0.59	-1.2
1,300,292	-		CCNA_01180	0.59	-0.9
1,300,292	-		CCNA_01180	0.59	-0.3
1,300,299	-		CCNA_01180	0.59	+0.5
1,300,299	-		CCNA_01180	0.59	+0.0
1,300,315	+		CCNA_01180	0.60	-2.5
1,300,421	-		CCNA_01180	0.65	+1.5
1,300,445	-		CCNA_01180	0.66	-0.7
1,300,454	+		CCNA_01180	0.66	+0.6
1,300,504	-		CCNA_01180	0.69	-1.5
1,300,538	-		CCNA_01180	0.70	+0.6
1,300,567	+		CCNA_01180	0.72	-0.9
1,300,664	-		CCNA_01180	0.76	+0.0
1,300,676	+		CCNA_01180	0.77	-0.5
1,300,676	+		CCNA_01180	0.77	-0.5
1,300,676	+		CCNA_01180	0.77	+0.4
1,300,724	+		CCNA_01180	0.79	-0.3
1,300,732	-		CCNA_01180	0.79	-0.1
1,300,781	+		CCNA_01180	0.81	-0.4
1,300,781	+		CCNA_01180	0.81	-2.2
1,300,781	+		CCNA_01180	0.81	-0.7
1,300,786	+		CCNA_01180	0.82	+1.1
1,300,789	-		CCNA_01180	0.82	+1.3
1,300,795	+		CCNA_01180	0.82	-0.7
1,300,827	+		CCNA_01180	0.84	-1.1
1,300,835	-		CCNA_01180	0.84	-0.7
1,300,844	+		CCNA_01180	0.84	-0.3
1,300,844	+		CCNA_01180	0.84	-1.8
1,300,847	-		CCNA_01180	0.84	+0.0
1,300,860	+		CCNA_01180	0.85	-1.7
1,300,878	+		CCNA_01180	0.86	-1.0
1,300,894	+		CCNA_01180	0.87	+0.2
1,300,895	+		CCNA_01180	0.87	-1.3
1,300,900	+		CCNA_01180	0.87	-1.0
1,300,912	-		CCNA_01180	0.87	-0.1
1,300,913	-		CCNA_01180	0.87	+0.0
1,300,931	-		CCNA_01180	0.88	-0.5
1,300,961	-		CCNA_01180	0.90	-0.5
1,300,965	+		CCNA_01180	0.90	-1.2
1,300,967	-		CCNA_01180	0.90	+0.7
1,300,994	-				-0.2
1,300,997	+				-0.3
1,301,005	-				-0.4
1,301,006	-				+0.8
1,301,009	+				-1.0
1,301,011	-				+0.2
1,301,015	-				+0.2
1,301,039	-				-0.3
1,301,073	+				-0.0
1,301,094	+				-1.2
1,301,128	-				-0.0
1,301,155	+				+0.2
1,301,163	-				+0.6
1,301,163	-				+0.0
1,301,163	-				+0.5
1,301,171	-				+0.3
1,301,235	-				+0.3
1,301,252	-				-0.2
1,301,294	+				+0.0
1,301,294	+				+0.2
1,301,294	+				-2.1
1,301,302	-				+0.7
1,301,309	+				-3.2
1,301,309	+				-0.6
1,301,317	-				+0.2
1,301,342	-		CCNA_01181	0.12	+0.4
1,301,361	+		CCNA_01181	0.16	-0.2
1,301,375	+		CCNA_01181	0.18	-0.5
1,301,383	-		CCNA_01181	0.20	+0.1
1,301,383	-		CCNA_01181	0.20	+0.5
1,301,383	-		CCNA_01181	0.20	+0.2
1,301,407	-		CCNA_01181	0.25	+0.0
1,301,477	-		CCNA_01181	0.38	+0.1
1,301,522	-		CCNA_01181	0.46	+0.8
1,301,522	-		CCNA_01181	0.46	+0.5
1,301,522	-		CCNA_01181	0.46	+0.2
1,301,590	-		CCNA_01181	0.59	-0.1
1,301,596	-		CCNA_01181	0.61	+0.2
1,301,616	+		CCNA_01181	0.64	+0.6
1,301,643	-		CCNA_01181	0.70	-0.0
1,301,658	-		CCNA_01181	0.72	+0.3
1,301,740	+		CCNA_01181	0.88	-0.3
1,301,838	+				-0.5
1,301,838	+				-0.3
1,301,838	+				-0.6
1,301,838	+				-0.6
1,301,846	-				+0.4
1,301,846	-				+0.5
1,301,859	+				-0.6
1,301,893	+				+1.1
1,301,893	+				-0.4
1,301,906	-				-2.3
1,301,989	-				-1.6
1,301,990	+				+0.3
1,301,990	+				-0.0
1,301,990	+				+0.5
1,301,995	+				+0.5
1,302,077	+		CCNA_01182	0.14	-0.4
1,302,082	+		CCNA_01182	0.15	-0.2
1,302,136	-		CCNA_01182	0.24	-0.5
1,302,137	+		CCNA_01182	0.24	+1.4
1,302,137	+		CCNA_01182	0.24	+0.5
1,302,137	+		CCNA_01182	0.24	+1.5
1,302,138	-		CCNA_01182	0.24	-0.8
1,302,139	+		CCNA_01182	0.25	-0.8
1,302,145	-		CCNA_01182	0.26	-2.0
1,302,145	-		CCNA_01182	0.26	-0.5
1,302,145	-		CCNA_01182	0.26	-0.3
1,302,145	-		CCNA_01182	0.26	-0.6
1,302,145	-		CCNA_01182	0.26	-0.5
1,302,145	-		CCNA_01182	0.26	-0.6
1,302,145	-		CCNA_01182	0.26	-1.2
1,302,160	-		CCNA_01182	0.28	-1.8
1,302,180	-		CCNA_01182	0.31	+1.5