Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2035

Experiment: BG11 with nitrate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with nitrate 100 mM
2,103,552	-		Synpcc7942_2034	0.23	+1.2
2,103,552	-		Synpcc7942_2034	0.23	-0.4
2,103,578	+		Synpcc7942_2034	0.25	+0.4
2,103,580	+		Synpcc7942_2034	0.25	-0.1
2,103,600	+		Synpcc7942_2034	0.27	+0.4
2,103,600	+		Synpcc7942_2034	0.27	+0.8
2,103,643	+		Synpcc7942_2034	0.30	-0.3
2,103,643	+		Synpcc7942_2034	0.30	-1.4
2,103,644	-		Synpcc7942_2034	0.30	+0.2
2,103,648	+		Synpcc7942_2034	0.31	+0.0
2,103,648	+		Synpcc7942_2034	0.31	+2.0
2,103,648	+		Synpcc7942_2034	0.31	-0.1
2,103,656	-		Synpcc7942_2034	0.31	+1.2
2,103,656	-		Synpcc7942_2034	0.31	+1.0
2,103,665	+		Synpcc7942_2034	0.32	+0.9
2,103,673	-		Synpcc7942_2034	0.33	+0.0
2,103,673	-		Synpcc7942_2034	0.33	-0.4
2,103,694	+		Synpcc7942_2034	0.34	-1.1
2,103,704	+		Synpcc7942_2034	0.35	-0.6
2,103,727	-		Synpcc7942_2034	0.37	-1.4
2,103,735	+		Synpcc7942_2034	0.38	+1.0
2,103,745	+		Synpcc7942_2034	0.38	+0.4
2,103,748	-		Synpcc7942_2034	0.39	+1.1
2,103,753	-		Synpcc7942_2034	0.39	-1.5
2,103,763	+		Synpcc7942_2034	0.40	+1.0
2,103,773	-		Synpcc7942_2034	0.41	-0.2
2,103,773	-		Synpcc7942_2034	0.41	-2.6
2,103,800	-		Synpcc7942_2034	0.43	+0.1
2,103,807	+		Synpcc7942_2034	0.43	-1.7
2,103,812	+		Synpcc7942_2034	0.44	-0.2
2,103,815	-		Synpcc7942_2034	0.44	+0.4
2,103,843	+		Synpcc7942_2034	0.46	-2.4
2,103,857	-		Synpcc7942_2034	0.47	-0.7
2,103,857	-		Synpcc7942_2034	0.47	+0.8
2,103,903	+		Synpcc7942_2034	0.51	-0.3
2,103,922	+		Synpcc7942_2034	0.53	-2.9
2,103,930	-		Synpcc7942_2034	0.53	-0.4
2,103,953	+		Synpcc7942_2034	0.55	-1.5
2,103,958	+		Synpcc7942_2034	0.56	-2.6
2,103,963	+		Synpcc7942_2034	0.56	-0.9
2,103,994	-		Synpcc7942_2034	0.58	-0.5
2,104,009	-		Synpcc7942_2034	0.60	+0.4
2,104,035	-		Synpcc7942_2034	0.62	-1.3
2,104,046	-		Synpcc7942_2034	0.63	+0.5
2,104,070	+		Synpcc7942_2034	0.65	-0.6
2,104,073	+		Synpcc7942_2034	0.65	-0.8
2,104,112	-		Synpcc7942_2034	0.68	-0.8
2,104,128	+		Synpcc7942_2034	0.69	-0.9
2,104,145	+		Synpcc7942_2034	0.71	+0.4
2,104,147	+		Synpcc7942_2034	0.71	+0.4
2,104,149	+		Synpcc7942_2034	0.71	+0.4
2,104,157	-		Synpcc7942_2034	0.72	-0.1
2,104,164	+		Synpcc7942_2034	0.72	+0.4
2,104,173	-		Synpcc7942_2034	0.73	-0.9
2,104,202	+		Synpcc7942_2034	0.75	-1.7
2,104,202	+		Synpcc7942_2034	0.75	-1.9
2,104,212	+		Synpcc7942_2034	0.76	-0.6
2,104,212	+		Synpcc7942_2034	0.76	-0.3
2,104,226	-		Synpcc7942_2034	0.77	-0.7
2,104,245	+		Synpcc7942_2034	0.79	-0.4
2,104,277	+		Synpcc7942_2034	0.81	-2.1
2,104,278	+		Synpcc7942_2034	0.81	+1.5
2,104,294	-		Synpcc7942_2034	0.83	-2.3
2,104,308	+		Synpcc7942_2034	0.84	-1.0
2,104,310	+		Synpcc7942_2034	0.84	+0.4
2,104,315	+		Synpcc7942_2034	0.84	+0.7
2,104,316	-		Synpcc7942_2034	0.84	+0.6
2,104,318	-		Synpcc7942_2034	0.85	-0.7
2,104,323	-		Synpcc7942_2034	0.85	-0.0
2,104,323	-		Synpcc7942_2034	0.85	-0.2
2,104,367	-		Synpcc7942_2034	0.89	-1.2
2,104,395	+				+0.0
2,104,403	-				+0.1
2,104,433	+				+0.2
2,104,434	-				-0.4
2,104,447	-				-1.6
2,104,454	+				+0.2
2,104,501	-				-1.1
2,104,575	-				+0.2
2,104,596	-		Synpcc7942_2035	0.11	-0.8
2,104,640	-		Synpcc7942_2035	0.15	-0.2
2,104,678	+		Synpcc7942_2035	0.19	-2.2
2,104,686	-		Synpcc7942_2035	0.20	-0.6
2,104,696	+		Synpcc7942_2035	0.21	+0.3
2,104,696	-		Synpcc7942_2035	0.21	+1.1
2,104,704	-				-0.3
2,104,744	+		Synpcc7942_2035	0.25	+0.4
2,104,752	-		Synpcc7942_2035	0.26	+1.3
2,104,752	-		Synpcc7942_2035	0.26	+1.3
2,104,752	-		Synpcc7942_2035	0.26	+1.3
2,104,752	-		Synpcc7942_2035	0.26	+0.3
2,104,780	+		Synpcc7942_2035	0.29	-1.3
2,104,822	-		Synpcc7942_2035	0.33	-1.4
2,104,839	+		Synpcc7942_2035	0.34	-0.2
2,104,842	-		Synpcc7942_2035	0.35	-0.6
2,104,848	+		Synpcc7942_2035	0.35	+1.1
2,104,861	+		Synpcc7942_2035	0.37	+0.7
2,104,882	+		Synpcc7942_2035	0.39	+0.2
2,104,888	+		Synpcc7942_2035	0.39	+0.8
2,104,893	+		Synpcc7942_2035	0.40	-1.5
2,104,903	+		Synpcc7942_2035	0.41	-0.8
2,104,912	-		Synpcc7942_2035	0.42	-0.1
2,104,939	+		Synpcc7942_2035	0.44	-0.7
2,104,948	+		Synpcc7942_2035	0.45	-2.2
2,104,995	-		Synpcc7942_2035	0.50	+1.0
2,105,007	+		Synpcc7942_2035	0.51	+0.0
2,105,007	+		Synpcc7942_2035	0.51	+0.4
2,105,007	+		Synpcc7942_2035	0.51	-0.2
2,105,026	-		Synpcc7942_2035	0.53	-0.4
2,105,035	-		Synpcc7942_2035	0.53	+0.9
2,105,042	+		Synpcc7942_2035	0.54	-0.3
2,105,042	+				-0.3
2,105,068	+		Synpcc7942_2035	0.57	-0.1
2,105,077	+		Synpcc7942_2035	0.57	+2.0
2,105,080	-		Synpcc7942_2035	0.58	+0.2
2,105,085	+		Synpcc7942_2035	0.58	+0.2
2,105,085	+		Synpcc7942_2035	0.58	+0.1
2,105,093	-		Synpcc7942_2035	0.59	+1.3
2,105,093	-		Synpcc7942_2035	0.59	+0.7
2,105,094	+		Synpcc7942_2035	0.59	+1.2
2,105,099	+		Synpcc7942_2035	0.60	+0.3
2,105,099	+		Synpcc7942_2035	0.60	+0.4
2,105,102	-		Synpcc7942_2035	0.60	+0.8
2,105,102	-		Synpcc7942_2035	0.60	-0.6
2,105,107	-		Synpcc7942_2035	0.60	+0.5
2,105,111	+		Synpcc7942_2035	0.61	+0.6
2,105,158	-		Synpcc7942_2035	0.65	-1.4
2,105,171	-		Synpcc7942_2035	0.66	-0.3
2,105,186	-		Synpcc7942_2035	0.68	-0.3
2,105,188	+		Synpcc7942_2035	0.68	-0.5
2,105,200	-		Synpcc7942_2035	0.69	-1.4
2,105,200	-		Synpcc7942_2035	0.69	-0.8
2,105,310	+		Synpcc7942_2035	0.80	-1.3
2,105,322	-		Synpcc7942_2035	0.81	+0.7
2,105,338	+		Synpcc7942_2035	0.83	+1.5
2,105,341	-		Synpcc7942_2035	0.83	+0.7
2,105,366	+		Synpcc7942_2035	0.85	+1.0
2,105,412	-		Synpcc7942_2035	0.90	+0.6
2,105,446	+				-1.1
2,105,454	-				-0.8
2,105,454	-				-0.6
2,105,454	-				-0.6
2,105,475	+				-0.5
2,105,483	-				-0.9
2,105,507	-				-1.6
2,105,520	+				-1.4
2,105,523	-				+0.9
2,105,533	-				+0.5
2,105,541	+				-1.8
2,105,552	-				+0.2
2,105,564	-				+0.5
2,105,576	-				-1.9
2,105,595	-				-0.8
2,105,631	-		Synpcc7942_2036	0.11	+0.1
2,105,643	-		Synpcc7942_2036	0.12	-1.0
2,105,710	-		Synpcc7942_2036	0.19	+1.5
2,105,803	+		Synpcc7942_2036	0.28	-0.8
2,105,834	+		Synpcc7942_2036	0.31	+0.2
2,105,842	-		Synpcc7942_2036	0.32	-2.1
2,105,842	-		Synpcc7942_2036	0.32	-0.3
2,105,852	-		Synpcc7942_2036	0.33	-0.0
2,105,867	-		Synpcc7942_2036	0.34	-2.0
2,105,890	+		Synpcc7942_2036	0.37	-0.5
2,105,898	-		Synpcc7942_2036	0.37	+0.3
2,105,898	-		Synpcc7942_2036	0.37	-0.6
2,106,023	+		Synpcc7942_2036	0.50	+1.5
2,106,023	+		Synpcc7942_2036	0.50	-0.0
2,106,025	-		Synpcc7942_2036	0.50	-0.3
2,106,032	+		Synpcc7942_2036	0.51	+5.9
2,106,040	-		Synpcc7942_2036	0.52	+1.6
2,106,058	+		Synpcc7942_2036	0.53	+0.4
2,106,060	+		Synpcc7942_2036	0.54	-0.3
2,106,092	-		Synpcc7942_2036	0.57	-0.2
2,106,097	-		Synpcc7942_2036	0.57	-1.4
2,106,176	+		Synpcc7942_2036	0.65	+0.9
2,106,190	-		Synpcc7942_2036	0.66	+0.1
2,106,197	+		Synpcc7942_2036	0.67	-1.2
2,106,205	-		Synpcc7942_2036	0.68	-0.3
2,106,256	-		Synpcc7942_2036	0.73	+0.7
2,106,309	+		Synpcc7942_2036	0.78	-0.3
2,106,322	-		Synpcc7942_2036	0.80	+0.2
2,106,326	+		Synpcc7942_2036	0.80	-0.6
2,106,327	+		Synpcc7942_2036	0.80	-0.8
2,106,327	+		Synpcc7942_2036	0.80	+1.9
2,106,327	+		Synpcc7942_2036	0.80	+0.0
2,106,327	+		Synpcc7942_2036	0.80	+1.4
2,106,327	+		Synpcc7942_2036	0.80	-0.4
2,106,327	+		Synpcc7942_2036	0.80	+0.6
2,106,327	+		Synpcc7942_2036	0.80	-0.8
2,106,327	+		Synpcc7942_2036	0.80	+0.2
2,106,332	+		Synpcc7942_2036	0.81	-0.7
2,106,334	-		Synpcc7942_2036	0.81	+1.0
2,106,335	-		Synpcc7942_2036	0.81	+0.8
2,106,335	-		Synpcc7942_2036	0.81	-0.6
2,106,335	-		Synpcc7942_2036	0.81	-0.7
2,106,339	+		Synpcc7942_2036	0.81	+1.2
2,106,344	+		Synpcc7942_2036	0.82	-1.8
2,106,344	+		Synpcc7942_2036	0.82	+1.2
2,106,344	+		Synpcc7942_2036	0.82	+1.0
2,106,354	+		Synpcc7942_2036	0.83	+0.9
2,106,399	+		Synpcc7942_2036	0.87	-0.9
2,106,407	-		Synpcc7942_2036	0.88	-1.1
2,106,429	-				-1.0
2,106,453	+				-1.0
2,106,505	+				+1.5