Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4480

Experiment: Nitrate reduction, replicate B t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t1
4,940,575	+		Pf1N1B4_4479	0.12	-1.8
4,940,773	+		Pf1N1B4_4479	0.30	+0.0
4,940,774	-				-1.0
4,940,774	-		Pf1N1B4_4479	0.31	+0.0
4,940,774	-		Pf1N1B4_4479	0.31	+0.0
4,940,788	+		Pf1N1B4_4479	0.32	+0.0
4,940,789	-		Pf1N1B4_4479	0.32	-2.3
4,940,851	+		Pf1N1B4_4479	0.38	-1.0
4,940,852	-		Pf1N1B4_4479	0.38	+0.0
4,940,852	-		Pf1N1B4_4479	0.38	+0.0
4,940,935	+		Pf1N1B4_4479	0.46	+0.0
4,940,935	+		Pf1N1B4_4479	0.46	+0.0
4,941,010	+		Pf1N1B4_4479	0.53	+0.0
4,941,095	-		Pf1N1B4_4479	0.61	+0.0
4,941,209	-		Pf1N1B4_4479	0.72	-0.9
4,941,323	-		Pf1N1B4_4479	0.82	+0.0
4,941,367	+		Pf1N1B4_4479	0.86	+0.0
4,941,563	+				+0.0
4,941,782	+		Pf1N1B4_4480	0.22	+0.0
4,941,970	-		Pf1N1B4_4480	0.37	+0.0
4,942,235	+		Pf1N1B4_4480	0.59	-2.0
4,942,427	+		Pf1N1B4_4480	0.74	-1.6
4,942,668	-				+0.0
4,942,753	+				+0.0
4,942,753	+				+0.0
4,942,753	+				-3.3
4,942,779	-				-2.0
4,942,779	-				+0.0
4,942,851	-				+0.0
4,942,904	-				+0.0
4,943,226	+		Pf1N1B4_4481	0.60	-2.8
4,943,251	-		Pf1N1B4_4481	0.65	+0.0
4,943,251	-				-2.0
4,943,370	+		Pf1N1B4_4481	0.90	+0.0
4,943,370	+		Pf1N1B4_4481	0.90	-1.9
4,943,370	+		Pf1N1B4_4481	0.90	-3.3
4,943,372	+				+0.1
4,943,372	+				-1.5
4,943,372	+				-1.6
4,943,372	+				+0.0
4,943,550	+				+0.0
4,943,550	+				+0.0
4,943,578	-				-2.3