Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4224

Experiment: Nitrate reduction, replicate B t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t1
4,679,734	+		Pf1N1B4_4223	0.39	-1.7
4,679,734	+		Pf1N1B4_4223	0.39	-1.8
4,679,807	+		Pf1N1B4_4223	0.47	-2.2
4,679,884	-				+0.0
4,679,933	+				-2.6
4,679,934	-		Pf1N1B4_4223	0.61	+0.0
4,679,934	-		Pf1N1B4_4223	0.61	-2.2
4,680,137	-		Pf1N1B4_4223	0.84	+0.0
4,680,244	-				-2.6
4,680,303	+				+0.0
4,680,380	-				+0.0
4,680,403	-				+0.0
4,680,433	+				-1.2
4,680,433	+				+0.0
4,680,437	+				+0.0
4,680,437	+				+0.0
4,680,438	-				+0.0
4,680,542	+				-1.6
4,680,793	+				-1.4
4,680,946	+				+0.0
4,680,946	+				-1.3
4,680,946	+				+0.0
4,680,947	-				+0.0
4,680,982	+				+0.0
4,680,982	+				-1.0
4,681,083	+				-2.2
4,681,083	+		Pf1N1B4_4225	0.14	+0.0
4,681,396	+		Pf1N1B4_4225	0.47	-2.2
4,681,405	+		Pf1N1B4_4225	0.48	+0.0
4,681,499	-		Pf1N1B4_4225	0.58	-1.7
4,681,657	+		Pf1N1B4_4225	0.74	+0.0
4,681,658	-		Pf1N1B4_4225	0.74	+0.0
4,681,669	+				-1.2
4,681,670	-		Pf1N1B4_4225	0.75	-3.1
4,681,670	-				+0.0
4,681,772	+		Pf1N1B4_4225	0.86	-3.4