Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2965

Experiment: Nitrate reduction, replicate B t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t1
3,325,536	+				+0.0
3,325,536	+				-2.4
3,325,537	-				+0.0
3,325,537	-				+0.0
3,325,537	-				+0.0
3,325,568	+				-1.6
3,325,603	+				+0.0
3,325,604	-				+0.0
3,325,604	-				+0.0
3,325,655	+		Pf1N1B4_2964	0.10	+0.0
3,325,655	+		Pf1N1B4_2964	0.10	-1.5
3,325,655	+		Pf1N1B4_2964	0.10	-1.4
3,325,655	+		Pf1N1B4_2964	0.10	+0.1
3,325,655	+		Pf1N1B4_2964	0.10	-2.6
3,325,712	+		Pf1N1B4_2964	0.18	+0.0
3,325,712	+		Pf1N1B4_2964	0.18	+0.0
3,325,712	+		Pf1N1B4_2964	0.18	+0.0
3,325,713	-		Pf1N1B4_2964	0.18	+0.0
3,325,713	-		Pf1N1B4_2964	0.18	-1.6
3,325,836	-		Pf1N1B4_2964	0.35	-1.8
3,325,836	-		Pf1N1B4_2964	0.35	-0.8
3,325,836	-		Pf1N1B4_2964	0.35	+0.0
3,325,979	+		Pf1N1B4_2964	0.55	-0.8
3,325,979	+		Pf1N1B4_2964	0.55	+0.0
3,325,980	-		Pf1N1B4_2964	0.55	-1.4
3,326,120	+		Pf1N1B4_2964	0.75	+0.0
3,326,120	+		Pf1N1B4_2964	0.75	-2.3
3,326,120	+		Pf1N1B4_2964	0.75	+0.0
3,326,120	+		Pf1N1B4_2964	0.75	-1.5
3,326,120	+		Pf1N1B4_2964	0.75	+0.0
3,326,121	-		Pf1N1B4_2964	0.75	+0.0
3,326,121	-		Pf1N1B4_2964	0.75	-2.2
3,326,121	-		Pf1N1B4_2964	0.75	-1.5
3,326,121	-		Pf1N1B4_2964	0.75	+0.0
3,326,121	-		Pf1N1B4_2964	0.75	+0.0
3,326,268	-				+0.0
3,326,300	+				+0.0
3,326,300	+				-1.2
3,326,300	+				+0.0
3,326,300	+				+0.0
3,326,300	+				-1.5
3,326,300	+				+0.0
3,326,300	+				-2.0
3,326,300	+				+0.0
3,326,300	+				+0.0
3,326,301	-				-2.5
3,326,301	-				+0.0
3,326,301	-				+0.0
3,326,301	-				+0.0
3,326,324	+				+0.0
3,326,325	-				+0.0
3,326,325	-				-1.1
3,326,417	-				+0.0
3,326,425	+				+0.0
3,326,425	+				+0.0
3,326,425	+				+0.0
3,326,425	+				+0.0
3,326,426	-				-1.3
3,326,426	-				+0.0
3,326,426	-				+0.0
3,326,453	-				+0.0
3,326,453	-				-2.7
3,326,453	-				-2.6
3,326,453	-				-2.2
3,326,453	-				-1.7
3,326,453	-				+0.0
3,326,453	-				-1.1
3,326,453	-				-1.1
3,326,453	-				-1.9
3,327,612	+				-2.7
3,327,617	+				-1.8
3,327,617	+				+0.0
3,327,617	+				-2.7
3,327,617	+				-3.3
3,327,617	+				+0.0
3,327,617	+				-1.5
3,327,617	+				+0.0
3,327,617	+				+0.0
3,327,617	+				+0.0
3,327,617	+				-1.6
3,327,727	+				-1.6
3,327,727	+				+0.0
3,327,728	-				-1.2
3,328,009	+		Pf1N1B4_2966	0.65	+0.0
3,328,174	-				-2.4
3,328,174	-				+0.0
3,328,191	-				-2.2
3,328,191	-				+0.0
3,328,191	-				-1.2
3,328,191	-				+0.0
3,328,191	-				-2.4
3,328,191	-				+0.0
3,328,216	+				+0.0
3,328,217	-				-1.0
3,328,217	-				-0.9
3,328,219	-				-2.3
3,328,238	-				+0.0
3,328,238	-				+0.0
3,328,260	+				-2.6
3,328,323	-				+0.0
3,328,323	-				+0.0
3,328,360	+				+0.0
3,328,360	+				+0.0
3,328,361	-				+0.0