Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2506

Experiment: Nitrate reduction, replicate B t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t1
2,842,744	+		Pf1N1B4_2505	0.53	+0.0
2,842,913	+		Pf1N1B4_2505	0.64	-0.0
2,842,913	+		Pf1N1B4_2505	0.64	-1.2
2,842,914	-		Pf1N1B4_2505	0.64	-0.0
2,843,103	+		Pf1N1B4_2505	0.75	-0.0
2,843,104	-		Pf1N1B4_2505	0.75	-0.6
2,843,189	+		Pf1N1B4_2505	0.80	-0.0
2,843,189	+		Pf1N1B4_2505	0.80	-3.4
2,843,189	+		Pf1N1B4_2505	0.80	-0.0
2,843,196	-		Pf1N1B4_2505	0.80	-0.0
2,843,226	+		Pf1N1B4_2505	0.82	-1.3
2,843,306	+		Pf1N1B4_2505	0.87	-0.7
2,843,307	-		Pf1N1B4_2505	0.87	-2.0
2,843,350	+		Pf1N1B4_2505	0.89	-0.0
2,843,413	-				-0.0
2,843,494	-				-0.0
2,843,570	-				-0.0
2,843,571	+				-0.0
2,843,572	-				-0.0
2,843,572	-				-0.0
2,843,572	-				-0.0
2,843,572	-				-0.0
2,843,594	-				-0.0
2,843,603	-				-0.0
2,843,616	-				-0.0
2,843,616	-				-0.0
2,843,616	-				-2.7
2,843,616	-				-0.0
2,843,672	+				-0.0
2,843,677	-				-0.0
2,843,677	-				-0.0
2,843,729	+				-0.0
2,843,878	+		Pf1N1B4_2506	0.29	-0.0
2,843,878	+		Pf1N1B4_2506	0.29	-1.7
2,843,878	+		Pf1N1B4_2506	0.29	-0.0
2,843,879	-		Pf1N1B4_2506	0.30	-0.0
2,843,983	+		Pf1N1B4_2506	0.52	-1.3
2,843,983	+		Pf1N1B4_2506	0.52	-1.3
2,843,983	+		Pf1N1B4_2506	0.52	-2.1
2,843,983	+		Pf1N1B4_2506	0.52	-0.0
2,843,983	+		Pf1N1B4_2506	0.52	-0.0
2,843,984	-				-0.0
2,843,984	-		Pf1N1B4_2506	0.52	-0.0
2,843,984	-		Pf1N1B4_2506	0.52	-0.0
2,843,984	-		Pf1N1B4_2506	0.52	-0.0
2,843,984	-		Pf1N1B4_2506	0.52	-1.0
2,844,244	+				-0.0
2,844,244	+				-1.7
2,844,245	-				-0.0
2,844,245	-				-0.0
2,844,299	+				-1.9
2,844,300	-				-0.0
2,844,322	+				-0.0
2,844,322	+				-0.7
2,844,322	+				-0.0
2,844,372	+		Pf1N1B4_2507	0.31	-0.0
2,844,373	-		Pf1N1B4_2507	0.32	-2.6
2,844,373	-		Pf1N1B4_2507	0.32	-0.0
2,844,408	+		Pf1N1B4_2507	0.54	-1.8
2,844,408	+		Pf1N1B4_2507	0.54	-1.9
2,844,409	-		Pf1N1B4_2507	0.54	-0.9
2,844,409	-		Pf1N1B4_2507	0.54	-0.0
2,844,415	+				-1.6
2,844,497	+				-0.0
2,844,497	+				-0.0
2,844,497	+				-2.5
2,844,556	+				-0.0
2,844,592	+				-1.5
2,844,592	+				-1.1
2,844,627	-				-0.0
2,844,688	+				-1.5
2,844,689	-				-0.0
2,844,689	-				-2.3
2,844,716	+				-0.0
2,844,716	+				-0.0
2,844,716	+				-0.0
2,844,716	+				-2.2
2,844,779	+				-0.0
2,844,780	-				-0.0
2,844,903	-				-3.3
2,844,906	+				-0.0
2,844,906	+				-0.7
2,844,906	+				-0.0
2,844,906	+				-0.0
2,844,906	+				-0.0
2,844,906	+				-0.0
2,844,906	+				-3.2
2,844,906	+				-1.8
2,844,906	+				-0.0
2,844,907	-				-1.6
2,844,907	-				+1.0
2,844,907	-				-0.0
2,844,985	-				-2.5
2,845,148	+		Pf1N1B4_2508	0.29	-0.0
2,845,148	+		Pf1N1B4_2508	0.29	-2.9
2,845,149	-		Pf1N1B4_2508	0.30	-3.0
2,845,149	-		Pf1N1B4_2508	0.30	-0.0
2,845,149	-		Pf1N1B4_2508	0.30	-0.0