Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2295

Experiment: Nitrate reduction, replicate B t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t1
2,611,883	+		Pf1N1B4_2294	0.53	-0.1
2,611,884	-		Pf1N1B4_2294	0.53	-0.1
2,611,884	-		Pf1N1B4_2294	0.53	-0.1
2,611,970	+		Pf1N1B4_2294	0.58	-0.1
2,612,036	+				-0.1
2,612,065	+		Pf1N1B4_2294	0.64	-0.1
2,612,065	+		Pf1N1B4_2294	0.64	-0.1
2,612,066	-		Pf1N1B4_2294	0.64	-3.0
2,612,066	-		Pf1N1B4_2294	0.64	-2.1
2,612,105	+		Pf1N1B4_2294	0.66	-1.6
2,612,105	+		Pf1N1B4_2294	0.66	-0.1
2,612,106	-		Pf1N1B4_2294	0.66	-0.1
2,612,106	-		Pf1N1B4_2294	0.66	-1.8
2,612,106	-		Pf1N1B4_2294	0.66	-0.1
2,612,207	+		Pf1N1B4_2294	0.72	-0.1
2,612,208	-		Pf1N1B4_2294	0.72	-1.1
2,612,253	-		Pf1N1B4_2294	0.75	-0.1
2,612,294	+		Pf1N1B4_2294	0.77	-2.6
2,612,295	-		Pf1N1B4_2294	0.77	-0.1
2,612,396	+		Pf1N1B4_2294	0.83	-0.1
2,612,396	+		Pf1N1B4_2294	0.83	-0.1
2,612,451	-		Pf1N1B4_2294	0.86	-0.1
2,612,498	+		Pf1N1B4_2294	0.89	-0.7
2,612,498	+		Pf1N1B4_2294	0.89	-0.1
2,612,813	+				-1.5
2,612,813	+				-0.1
2,612,813	+				-0.1
2,612,813	+				-0.1
2,612,813	+				-0.1
2,612,846	+		Pf1N1B4_2295	0.11	-0.5
2,612,846	+		Pf1N1B4_2295	0.11	-0.1
2,612,847	-		Pf1N1B4_2295	0.12	-0.1
2,612,847	-		Pf1N1B4_2295	0.12	-0.1
2,613,055	+		Pf1N1B4_2295	0.32	-0.1
2,613,056	-		Pf1N1B4_2295	0.32	-1.3
2,613,056	-		Pf1N1B4_2295	0.32	-1.4
2,613,194	+		Pf1N1B4_2295	0.45	-0.1
2,613,194	+		Pf1N1B4_2295	0.45	-0.1
2,613,195	-		Pf1N1B4_2295	0.45	-0.1
2,613,296	+		Pf1N1B4_2295	0.55	-0.1
2,613,296	+		Pf1N1B4_2295	0.55	-1.1
2,613,296	+		Pf1N1B4_2295	0.55	-0.1
2,613,297	-		Pf1N1B4_2295	0.55	-0.1
2,613,297	-		Pf1N1B4_2295	0.55	-0.1
2,613,297	-		Pf1N1B4_2295	0.55	-0.1
2,613,297	-		Pf1N1B4_2295	0.55	-0.1
2,613,329	+		Pf1N1B4_2295	0.58	-0.1
2,613,330	-		Pf1N1B4_2295	0.59	-2.0
2,613,330	-		Pf1N1B4_2295	0.59	-0.1
2,613,330	-		Pf1N1B4_2295	0.59	-0.1
2,613,569	+		Pf1N1B4_2295	0.82	-0.1
2,613,569	+		Pf1N1B4_2295	0.82	-0.1
2,613,569	+		Pf1N1B4_2295	0.82	-1.1
2,613,570	-		Pf1N1B4_2295	0.82	-0.1
2,613,570	-		Pf1N1B4_2295	0.82	-0.1
2,613,571	+		Pf1N1B4_2295	0.82	-0.1
2,613,572	-		Pf1N1B4_2295	0.82	-1.8
2,613,639	-		Pf1N1B4_2295	0.89	-0.1
2,613,639	-		Pf1N1B4_2295	0.89	-0.9
2,613,720	-				-0.1
2,613,752	+				-0.1
2,613,752	+				-0.1
2,613,752	+				-0.1
2,613,752	+				-0.1
2,613,752	+				-1.7
2,613,752	+				-0.1
2,613,752	+				-0.1
2,613,752	+				-0.1
2,613,753	-				-0.1
2,613,753	-				-0.1
2,613,753	-				-0.1
2,613,753	-				-1.1
2,613,753	-				-0.8
2,613,907	+				-2.0
2,613,939	+				-0.1
2,613,939	+				-2.8
2,613,939	+				-0.1
2,613,939	+				-0.1
2,614,140	+		Pf1N1B4_2296	0.23	-1.5
2,614,140	+		Pf1N1B4_2296	0.23	-1.8
2,614,255	+		Pf1N1B4_2296	0.33	-0.1
2,614,256	-		Pf1N1B4_2296	0.33	-0.1
2,614,258	-		Pf1N1B4_2296	0.33	-0.1
2,614,317	+		Pf1N1B4_2296	0.39	-1.7
2,614,317	+		Pf1N1B4_2296	0.39	-0.1
2,614,318	-		Pf1N1B4_2296	0.39	-1.7
2,614,350	+		Pf1N1B4_2296	0.42	-0.1
2,614,722	+		Pf1N1B4_2296	0.74	-0.1
2,614,723	-		Pf1N1B4_2296	0.74	-0.1