Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2122

Experiment: Nitrate reduction, replicate B t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t1
2,432,321	-				-0.1
2,433,219	-				-1.3
2,433,219	-				-0.1
2,433,219	-				-0.1
2,433,377	-		Pf1N1B4_2122	0.11	-0.1
2,433,377	-		Pf1N1B4_2122	0.11	-0.1
2,433,377	-		Pf1N1B4_2122	0.11	-0.1
2,433,377	-		Pf1N1B4_2122	0.11	-0.1
2,433,483	-		Pf1N1B4_2122	0.19	-0.1
2,433,497	+		Pf1N1B4_2122	0.20	-0.1
2,433,497	+		Pf1N1B4_2122	0.20	+0.9
2,433,503	+		Pf1N1B4_2122	0.20	-1.4
2,433,503	+		Pf1N1B4_2122	0.20	-0.1
2,433,503	+		Pf1N1B4_2122	0.20	-0.1
2,433,504	-		Pf1N1B4_2122	0.20	-2.0
2,433,504	-		Pf1N1B4_2122	0.20	-0.1
2,433,504	-		Pf1N1B4_2122	0.20	-0.1
2,433,504	-		Pf1N1B4_2122	0.20	-1.3
2,433,583	+		Pf1N1B4_2122	0.26	-0.1
2,433,583	+		Pf1N1B4_2122	0.26	-0.1
2,433,584	-		Pf1N1B4_2122	0.26	-0.1
2,433,584	-		Pf1N1B4_2122	0.26	-0.1
2,433,584	-		Pf1N1B4_2122	0.26	-0.1
2,433,626	+		Pf1N1B4_2122	0.29	-0.1
2,433,626	+		Pf1N1B4_2122	0.29	+0.8
2,433,626	+		Pf1N1B4_2122	0.29	-0.1
2,433,626	+		Pf1N1B4_2122	0.29	-0.1
2,433,626	+		Pf1N1B4_2122	0.29	-0.1
2,433,627	-		Pf1N1B4_2122	0.29	-0.1
2,433,627	-		Pf1N1B4_2122	0.29	-0.1
2,433,627	-		Pf1N1B4_2122	0.29	-0.1
2,434,138	+		Pf1N1B4_2122	0.66	-5.1
2,434,138	+		Pf1N1B4_2122	0.66	-1.6
2,434,138	+		Pf1N1B4_2122	0.66	-0.1
2,434,139	-		Pf1N1B4_2122	0.66	-1.4
2,434,139	-		Pf1N1B4_2122	0.66	-0.1
2,434,273	+		Pf1N1B4_2122	0.75	-0.7
2,434,273	+		Pf1N1B4_2122	0.75	-0.1
2,434,274	-		Pf1N1B4_2122	0.75	-0.1
2,434,274	-		Pf1N1B4_2122	0.75	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-2.0
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-1.5
2,434,326	+		Pf1N1B4_2122	0.79	-2.3
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,326	+		Pf1N1B4_2122	0.79	-0.1
2,434,327	-		Pf1N1B4_2122	0.79	-1.0
2,434,327	-		Pf1N1B4_2122	0.79	-0.1
2,434,327	-		Pf1N1B4_2122	0.79	-0.1
2,434,327	-		Pf1N1B4_2122	0.79	-0.6
2,434,327	-		Pf1N1B4_2122	0.79	-0.1
2,434,339	+		Pf1N1B4_2122	0.80	-0.1
2,434,339	+		Pf1N1B4_2122	0.80	-0.1
2,434,340	-		Pf1N1B4_2122	0.80	-0.4
2,434,340	-		Pf1N1B4_2122	0.80	-0.1
2,434,340	-		Pf1N1B4_2122	0.80	-0.1
2,434,340	-		Pf1N1B4_2122	0.80	-2.2
2,434,340	-		Pf1N1B4_2122	0.80	-0.1
2,434,342	+		Pf1N1B4_2122	0.80	-2.0
2,434,342	+		Pf1N1B4_2122	0.80	-0.1
2,434,342	+		Pf1N1B4_2122	0.80	-0.1
2,434,343	-		Pf1N1B4_2122	0.80	-1.1
2,434,343	-		Pf1N1B4_2122	0.80	-0.6
2,434,343	-		Pf1N1B4_2122	0.80	-0.1
2,434,343	-		Pf1N1B4_2122	0.80	-0.1
2,434,461	+		Pf1N1B4_2122	0.89	-0.1
2,434,461	+		Pf1N1B4_2122	0.89	-0.1
2,434,462	-		Pf1N1B4_2122	0.89	-0.1
2,434,462	-		Pf1N1B4_2122	0.89	-0.1
2,434,516	+				-0.1
2,434,517	-				-0.1
2,434,517	-				-0.1
2,434,640	+		Pf1N1B4_2123	0.12	-0.1
2,434,640	+		Pf1N1B4_2123	0.12	-0.1
2,434,640	+		Pf1N1B4_2123	0.12	-0.1
2,434,640	+		Pf1N1B4_2123	0.12	-2.2
2,434,640	+		Pf1N1B4_2123	0.12	-0.9
2,434,640	+		Pf1N1B4_2123	0.12	-1.6
2,434,641	-		Pf1N1B4_2123	0.12	-1.1
2,434,694	+		Pf1N1B4_2123	0.39	-1.6
2,434,694	+		Pf1N1B4_2123	0.39	-0.9
2,434,694	+				-0.1
2,434,694	+		Pf1N1B4_2123	0.39	-0.1
2,434,694	+		Pf1N1B4_2123	0.39	-1.8
2,434,694	+		Pf1N1B4_2123	0.39	-2.6
2,434,695	-		Pf1N1B4_2123	0.39	-1.4
2,434,729	+		Pf1N1B4_2123	0.56	-0.1
2,434,729	+		Pf1N1B4_2123	0.56	-0.1
2,434,729	+		Pf1N1B4_2123	0.56	-0.1
2,434,729	+		Pf1N1B4_2123	0.56	-0.1
2,434,730	-		Pf1N1B4_2123	0.57	-1.0
2,434,730	-		Pf1N1B4_2123	0.57	-0.1
2,434,790	+		Pf1N1B4_2123	0.87	-0.1
2,434,791	-		Pf1N1B4_2123	0.87	-0.1
2,434,828	-				-0.1
2,435,345	-				-0.1
2,435,345	-				-0.4
2,435,345	-				-0.1