Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1925

Experiment: Nitrate reduction, replicate B t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B t1
2,200,526	+		Pf1N1B4_1924	0.56	-0.9
2,200,526	+		Pf1N1B4_1924	0.56	-0.0
2,200,584	+		Pf1N1B4_1924	0.62	-2.2
2,200,584	+		Pf1N1B4_1924	0.62	-0.0
2,200,584	+		Pf1N1B4_1924	0.62	-0.0
2,200,585	-		Pf1N1B4_1924	0.62	-0.0
2,200,585	-		Pf1N1B4_1924	0.62	-1.1
2,200,585	-		Pf1N1B4_1924	0.62	-0.0
2,200,585	-		Pf1N1B4_1924	0.62	-1.5
2,200,585	-		Pf1N1B4_1924	0.62	-0.0
2,200,585	-		Pf1N1B4_1924	0.62	-2.4
2,200,585	-		Pf1N1B4_1924	0.62	-0.0
2,200,585	-		Pf1N1B4_1924	0.62	-1.7
2,200,585	-		Pf1N1B4_1924	0.62	-0.0
2,200,585	-		Pf1N1B4_1924	0.62	-2.5
2,200,585	-		Pf1N1B4_1924	0.62	-0.0
2,200,756	+				-2.9
2,200,756	+		Pf1N1B4_1924	0.80	-1.0
2,200,756	+		Pf1N1B4_1924	0.80	-0.0
2,200,756	+		Pf1N1B4_1924	0.80	-0.0
2,200,757	-		Pf1N1B4_1924	0.80	-0.0
2,200,757	-		Pf1N1B4_1924	0.80	-4.3
2,200,757	-		Pf1N1B4_1924	0.80	-0.0
2,200,757	-		Pf1N1B4_1924	0.80	-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-1.1
2,200,872	+				-0.0
2,200,872	+				-0.0
2,200,872	+				-0.1
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,873	-				-1.9
2,200,873	-				-0.9
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,873	-				-0.0
2,200,946	+				-0.0
2,200,946	+				-2.0
2,200,946	+				-0.0
2,200,946	+				-0.0
2,200,979	+				-0.0
2,200,979	+				-0.0
2,200,979	+				-1.5
2,201,010	-				-0.0
2,201,010	-				-0.0
2,201,048	+				-0.0
2,201,048	+				-0.0
2,201,048	+				-1.5
2,201,048	+				-1.4
2,201,048	+				-0.0
2,201,048	+				-0.0
2,201,048	+				-1.1
2,201,048	+				-0.0
2,201,048	+				-2.7
2,201,048	+				-0.0
2,201,048	+				-0.0
2,201,049	-				-2.0
2,201,049	-				-0.8
2,201,049	-				-0.0
2,201,049	-				-0.7
2,201,049	-				-0.0
2,201,049	-				-2.3
2,201,049	-				-0.0
2,201,049	-				-0.0
2,201,049	-				-1.0
2,201,062	+				-0.0
2,201,062	+				-0.0
2,201,087	-				-1.9
2,201,106	-				-0.0
2,201,280	+				-1.3
2,201,280	+				-1.0
2,201,280	+				-0.0
2,201,280	+				-2.5
2,201,280	+				-0.0
2,201,281	-				-0.0
2,201,281	-				-0.0
2,201,281	-				-0.0
2,201,281	-				-1.6
2,201,281	-				-0.0
2,201,281	-				-2.0
2,201,333	+				-0.0
2,201,364	-				-2.1
2,201,489	+		Pf1N1B4_1925	0.14	-1.2
2,201,489	+		Pf1N1B4_1925	0.14	-0.0
2,201,489	+		Pf1N1B4_1925	0.14	-0.0
2,201,489	+		Pf1N1B4_1925	0.14	-0.0
2,201,489	+		Pf1N1B4_1925	0.14	-0.0
2,201,489	+		Pf1N1B4_1925	0.14	-1.3
2,201,489	+		Pf1N1B4_1925	0.14	-0.0
2,201,489	+		Pf1N1B4_1925	0.14	-0.8
2,201,489	+		Pf1N1B4_1925	0.14	-2.4
2,201,489	+		Pf1N1B4_1925	0.14	-0.0
2,201,490	-		Pf1N1B4_1925	0.14	-0.0
2,201,490	-		Pf1N1B4_1925	0.14	-0.0
2,201,490	-		Pf1N1B4_1925	0.14	-0.0
2,201,700	+		Pf1N1B4_1925	0.43	-0.0
2,201,700	+		Pf1N1B4_1925	0.43	-0.0
2,201,700	+		Pf1N1B4_1925	0.43	-0.0
2,201,701	-		Pf1N1B4_1925	0.43	-0.0
2,201,794	+		Pf1N1B4_1925	0.56	-0.0
2,201,794	+		Pf1N1B4_1925	0.56	-0.0
2,201,794	+				-0.0
2,201,794	+		Pf1N1B4_1925	0.56	-2.5
2,201,795	-		Pf1N1B4_1925	0.57	-0.0
2,201,795	-		Pf1N1B4_1925	0.57	-0.0
2,201,881	-		Pf1N1B4_1925	0.68	-0.0
2,201,934	+		Pf1N1B4_1925	0.76	-0.0
2,201,934	+		Pf1N1B4_1925	0.76	-2.4
2,201,935	-		Pf1N1B4_1925	0.76	-1.6
2,201,935	-		Pf1N1B4_1925	0.76	-0.0
2,201,935	-		Pf1N1B4_1925	0.76	-1.4
2,201,940	+		Pf1N1B4_1925	0.77	-0.0
2,201,940	+		Pf1N1B4_1925	0.77	-0.0
2,201,940	+		Pf1N1B4_1925	0.77	-0.0
2,201,940	+		Pf1N1B4_1925	0.77	-0.0
2,201,940	+		Pf1N1B4_1925	0.77	-1.0
2,201,940	+		Pf1N1B4_1925	0.77	-1.9
2,201,940	+		Pf1N1B4_1925	0.77	-1.7
2,201,940	+		Pf1N1B4_1925	0.77	-1.1
2,201,940	+		Pf1N1B4_1925	0.77	-0.0
2,201,940	+		Pf1N1B4_1925	0.77	-0.6
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,941	-		Pf1N1B4_1925	0.77	-2.7
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,941	-		Pf1N1B4_1925	0.77	-0.0
2,201,968	+		Pf1N1B4_1925	0.81	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	+0.5
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-2.5
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-2.1
2,201,996	+		Pf1N1B4_1925	0.84	-2.2
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,996	+		Pf1N1B4_1925	0.84	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-3.1
2,201,997	-		Pf1N1B4_1925	0.85	-0.8
2,201,997	-		Pf1N1B4_1925	0.85	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-0.2
2,201,997	-		Pf1N1B4_1925	0.85	-1.6
2,201,997	-		Pf1N1B4_1925	0.85	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-0.0
2,201,997	-		Pf1N1B4_1925	0.85	-1.7
2,201,997	-		Pf1N1B4_1925	0.85	-0.4
2,202,001	-		Pf1N1B4_1925	0.85	-0.0
2,202,060	+				-0.0
2,202,060	+				-0.0
2,202,060	+				-2.3
2,202,061	-				+1.0
2,202,061	-				-0.9
2,202,127	-				-0.0
2,202,142	+				-0.0