Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36360

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,802,538	-		PGA1_c36350	0.30	-3.3
3,802,572	+		PGA1_c36350	0.33	-2.6
3,802,628	+		PGA1_c36350	0.37	-2.1
3,802,633	+		PGA1_c36350	0.38	-2.7
3,802,645	+		PGA1_c36350	0.39	-1.9
3,802,675	+		PGA1_c36350	0.41	-2.4
3,802,704	-		PGA1_c36350	0.43	-4.1
3,802,764	+		PGA1_c36350	0.48	-3.1
3,802,806	+		PGA1_c36350	0.52	-0.8
3,802,814	-		PGA1_c36350	0.53	-2.3
3,802,876	-		PGA1_c36350	0.58	-3.7
3,802,947	+		PGA1_c36350	0.63	-2.8
3,802,957	-		PGA1_c36350	0.64	-2.8
3,802,989	-		PGA1_c36350	0.67	-2.5
3,803,008	+		PGA1_c36350	0.68	-2.1
3,803,045	-		PGA1_c36350	0.72	-0.8
3,803,068	+		PGA1_c36350	0.73	-3.6
3,803,092	+		PGA1_c36350	0.75	-1.3
3,803,100	-		PGA1_c36350	0.76	-2.1
3,803,170	-		PGA1_c36350	0.82	-1.5
3,803,186	+		PGA1_c36350	0.83	-1.9
3,803,186	+		PGA1_c36350	0.83	-4.0
3,803,191	+		PGA1_c36350	0.84	-2.6
3,803,191	+		PGA1_c36350	0.84	-2.5
3,803,194	-		PGA1_c36350	0.84	-1.6
3,803,194	-		PGA1_c36350	0.84	-2.1
3,803,194	-		PGA1_c36350	0.84	-2.0
3,803,199	-		PGA1_c36350	0.84	-1.6
3,803,199	-		PGA1_c36350	0.84	-1.9
3,803,199	-		PGA1_c36350	0.84	-1.1
3,803,199	-		PGA1_c36350	0.84	-1.3
3,803,199	-		PGA1_c36350	0.84	-3.0
3,803,220	-		PGA1_c36350	0.86	-1.3
3,803,255	+		PGA1_c36350	0.89	-1.8
3,803,255	+		PGA1_c36350	0.89	-2.6
3,803,255	+		PGA1_c36350	0.89	-3.5
3,803,260	+		PGA1_c36350	0.89	-3.5
3,803,263	-		PGA1_c36350	0.89	-4.0
3,803,283	+				-1.3
3,803,316	+				-2.2
3,803,330	-				-1.8
3,803,359	+				-0.1
3,803,359	+				-1.1
3,803,499	+				-0.9
3,803,504	+				-2.7
3,803,504	+				-2.5
3,803,507	-				-1.6
3,803,507	-				+0.2
3,803,507	-				-1.3
3,803,507	-				-2.3
3,803,538	-				-2.6
3,803,618	+		PGA1_c36360	0.11	-3.8
3,803,692	+		PGA1_c36360	0.17	-3.2
3,803,704	+		PGA1_c36360	0.17	-2.5
3,803,735	+		PGA1_c36360	0.20	-2.2
3,803,735	+		PGA1_c36360	0.20	-2.6
3,803,735	+		PGA1_c36360	0.20	-1.5
3,803,735	+		PGA1_c36360	0.20	-2.9
3,803,735	+		PGA1_c36360	0.20	-0.7
3,803,735	+		PGA1_c36360	0.20	-2.4
3,803,735	+		PGA1_c36360	0.20	-2.6
3,803,735	+		PGA1_c36360	0.20	-3.4
3,803,735	-		PGA1_c36360	0.20	-4.1
3,803,743	-		PGA1_c36360	0.20	-2.5
3,803,743	-		PGA1_c36360	0.20	-1.4
3,803,743	-		PGA1_c36360	0.20	-2.8
3,803,743	-		PGA1_c36360	0.20	-3.1
3,803,743	-		PGA1_c36360	0.20	-1.2
3,803,796	+		PGA1_c36360	0.24	-1.8
3,803,796	+		PGA1_c36360	0.24	-1.5
3,803,804	-		PGA1_c36360	0.25	-2.6
3,803,804	-		PGA1_c36360	0.25	-1.5
3,803,804	-		PGA1_c36360	0.25	-2.5
3,803,804	-		PGA1_c36360	0.25	-2.4
3,803,834	-		PGA1_c36360	0.27	-2.3
3,803,849	+		PGA1_c36360	0.28	-2.7
3,803,857	-		PGA1_c36360	0.29	-1.6
3,803,857	-		PGA1_c36360	0.29	-3.5
3,803,857	-		PGA1_c36360	0.29	-3.4
3,803,857	-		PGA1_c36360	0.29	-2.1
3,803,941	-		PGA1_c36360	0.35	-1.7
3,803,955	+		PGA1_c36360	0.36	-1.0
3,803,964	+		PGA1_c36360	0.36	-2.5
3,803,964	+		PGA1_c36360	0.36	-2.8
3,803,972	-		PGA1_c36360	0.37	-2.5
3,803,987	-		PGA1_c36360	0.38	-2.6
3,804,017	+		PGA1_c36360	0.40	-1.8
3,804,018	-		PGA1_c36360	0.40	-2.1
3,804,045	-		PGA1_c36360	0.42	+0.2
3,804,071	+		PGA1_c36360	0.44	-2.8
3,804,071	+		PGA1_c36360	0.44	-1.1
3,804,087	+		PGA1_c36360	0.45	-1.4
3,804,133	+		PGA1_c36360	0.49	-1.9
3,804,153	+		PGA1_c36360	0.50	-0.9
3,804,222	+		PGA1_c36360	0.55	-3.3
3,804,222	+		PGA1_c36360	0.55	-2.9
3,804,222	+		PGA1_c36360	0.55	-2.1
3,804,222	+		PGA1_c36360	0.55	-3.1
3,804,230	-		PGA1_c36360	0.56	+0.2
3,804,230	-		PGA1_c36360	0.56	-0.8
3,804,230	-		PGA1_c36360	0.56	-0.5
3,804,230	-		PGA1_c36360	0.56	-0.9
3,804,230	-		PGA1_c36360	0.56	-2.0
3,804,230	-		PGA1_c36360	0.56	-0.9
3,804,230	-		PGA1_c36360	0.56	-3.6
3,804,230	-		PGA1_c36360	0.56	-3.1
3,804,230	-		PGA1_c36360	0.56	-2.2
3,804,230	-		PGA1_c36360	0.56	-0.6
3,804,234	+		PGA1_c36360	0.56	-2.3
3,804,242	-		PGA1_c36360	0.57	-0.8
3,804,269	+		PGA1_c36360	0.59	-2.3
3,804,308	-		PGA1_c36360	0.62	-2.1
3,804,309	-		PGA1_c36360	0.62	-1.5
3,804,309	-		PGA1_c36360	0.62	-2.6
3,804,322	+		PGA1_c36360	0.63	-2.9
3,804,374	+		PGA1_c36360	0.66	-1.5
3,804,395	+		PGA1_c36360	0.68	-2.6
3,804,410	+		PGA1_c36360	0.69	-2.4
3,804,417	-		PGA1_c36360	0.70	-2.4
3,804,451	+		PGA1_c36360	0.72	-1.4
3,804,451	+		PGA1_c36360	0.72	-1.8
3,804,505	+		PGA1_c36360	0.76	-2.4
3,804,505	+		PGA1_c36360	0.76	-3.1
3,804,505	+		PGA1_c36360	0.76	-0.6
3,804,576	+		PGA1_c36360	0.81	-3.4
3,804,584	-		PGA1_c36360	0.82	-3.2
3,804,599	+		PGA1_c36360	0.83	-1.7
3,804,646	+		PGA1_c36360	0.86	-3.0
3,804,648	+		PGA1_c36360	0.86	-1.9
3,804,648	-		PGA1_c36360	0.86	-1.4
3,804,648	-		PGA1_c36360	0.86	-3.1
3,804,654	-		PGA1_c36360	0.87	-1.7
3,804,656	-		PGA1_c36360	0.87	-3.7
3,804,799	+				-0.9
3,804,807	-				-3.1
3,804,836	+				+0.6
3,804,869	-				+1.1
3,804,874	+				+0.4
3,804,889	+				-1.1
3,804,934	-				-0.1
3,804,941	+		PGA1_c36370	0.10	+1.9
3,804,941	+		PGA1_c36370	0.10	+2.1
3,804,972	+		PGA1_c36370	0.14	+0.2
3,804,973	+		PGA1_c36370	0.15	+1.8
3,804,980	-		PGA1_c36370	0.16	+0.8
3,804,992	-		PGA1_c36370	0.17	+1.9
3,804,992	-		PGA1_c36370	0.17	+0.4
3,805,062	+		PGA1_c36370	0.27	+1.6
3,805,074	+		PGA1_c36370	0.28	+3.2
3,805,089	-		PGA1_c36370	0.30	+0.9
3,805,120	+		PGA1_c36370	0.34	+1.3
3,805,120	-		PGA1_c36370	0.34	+1.3
3,805,128	-		PGA1_c36370	0.35	+0.6
3,805,128	-		PGA1_c36370	0.35	+1.2
3,805,161	-		PGA1_c36370	0.40	+2.4
3,805,161	-		PGA1_c36370	0.40	+0.5
3,805,271	+		PGA1_c36370	0.55	-0.2
3,805,271	+		PGA1_c36370	0.55	+2.0
3,805,271	+		PGA1_c36370	0.55	+1.7
3,805,271	+		PGA1_c36370	0.55	+0.7
3,805,279	-		PGA1_c36370	0.56	+0.8
3,805,279	-		PGA1_c36370	0.56	+1.6
3,805,279	-		PGA1_c36370	0.56	+2.7
3,805,279	-		PGA1_c36370	0.56	+1.9
3,805,296	+		PGA1_c36370	0.58	+1.6
3,805,296	+		PGA1_c36370	0.58	+1.3
3,805,299	-		PGA1_c36370	0.59	+2.0
3,805,359	-		PGA1_c36370	0.67	+0.7
3,805,359	-		PGA1_c36370	0.67	+2.2
3,805,359	-		PGA1_c36370	0.67	+1.4
3,805,361	+		PGA1_c36370	0.67	+2.0
3,805,361	+		PGA1_c36370	0.67	+1.4
3,805,361	+		PGA1_c36370	0.67	+1.4
3,805,361	+		PGA1_c36370	0.67	+1.8
3,805,369	-		PGA1_c36370	0.68	+1.2
3,805,369	-		PGA1_c36370	0.68	+1.4
3,805,369	-		PGA1_c36370	0.68	+2.1
3,805,369	-		PGA1_c36370	0.68	+0.9
3,805,450	-		PGA1_c36370	0.79	+0.5
3,805,634	+				-0.3
3,805,644	+				-0.3
3,805,662	+				-1.3
3,805,666	+				+0.1
3,805,707	+				+0.8
3,805,707	+				-0.1
3,805,716	-		PGA1_c36380	0.11	+0.2
3,805,716	-		PGA1_c36380	0.11	-0.8
3,805,720	+		PGA1_c36380	0.12	+0.0
3,805,723	-		PGA1_c36380	0.13	+0.8
3,805,723	-		PGA1_c36380	0.13	-0.1
3,805,809	+		PGA1_c36380	0.38	+0.4
3,805,809	+		PGA1_c36380	0.38	-0.6
3,805,809	+		PGA1_c36380	0.38	-0.4
3,805,809	+		PGA1_c36380	0.38	+0.5
3,805,809	+		PGA1_c36380	0.38	+0.4
3,805,812	-		PGA1_c36380	0.39	+0.2
3,805,817	-		PGA1_c36380	0.40	-0.1
3,805,817	-		PGA1_c36380	0.40	-0.5