Experiment: BHIS with 5-Fluorouracil 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0583 and BT0584 are separated by 153 nucleotides BT0584 and BT0585 are separated by 19 nucleotides BT0585 and BT0586 are separated by 116 nucleotides
BT0583: BT0583 - hypothetical protein (NCBI ptt file), at 720,420 to 721,514
BT0583
BT0584: BT0584 - putative outer membrane protein (NCBI ptt file), at 721,668 to 722,666
BT0584
BT0585: BT0585 - conserved hypothetical protein (NCBI ptt file), at 722,686 to 723,195
BT0585
BT0586: BT0586 - hypothetical protein (NCBI ptt file), at 723,312 to 724,004
BT0586
Position (kb) 721
722
723 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 720.741 kb on - strand, within BT0583 at 720.786 kb on - strand, within BT0583 at 720.802 kb on + strand, within BT0583 at 720.803 kb on - strand, within BT0583 at 720.865 kb on + strand, within BT0583 at 720.866 kb on - strand, within BT0583 at 720.869 kb on - strand, within BT0583 at 720.896 kb on + strand, within BT0583 at 720.903 kb on + strand, within BT0583 at 720.920 kb on + strand, within BT0583 at 720.921 kb on - strand, within BT0583 at 720.939 kb on - strand, within BT0583 at 721.094 kb on - strand, within BT0583 at 721.190 kb on - strand, within BT0583 at 721.276 kb on + strand, within BT0583 at 721.280 kb on + strand, within BT0583 at 721.280 kb on + strand, within BT0583 at 721.285 kb on + strand, within BT0583 at 721.366 kb on + strand, within BT0583 at 721.682 kb on - strand at 721.910 kb on - strand, within BT0584 at 722.208 kb on + strand, within BT0584 at 722.345 kb on + strand, within BT0584 at 722.345 kb on + strand, within BT0584 at 722.436 kb on - strand, within BT0584 at 722.465 kb on + strand, within BT0584 at 722.516 kb on - strand, within BT0584 at 722.582 kb on - strand at 722.785 kb on - strand, within BT0585 at 722.869 kb on + strand, within BT0585 at 723.067 kb on + strand, within BT0585 at 723.164 kb on + strand at 723.234 kb on - strand at 723.234 kb on - strand at 723.247 kb on - strand at 723.247 kb on - strand at 723.247 kb on - strand at 723.287 kb on - strand at 723.330 kb on - strand at 723.353 kb on + strand at 723.407 kb on - strand, within BT0586 at 723.473 kb on - strand, within BT0586 at 723.523 kb on + strand, within BT0586 at 723.523 kb on + strand, within BT0586 at 723.523 kb on + strand, within BT0586 at 723.525 kb on + strand, within BT0586 at 723.526 kb on - strand, within BT0586 at 723.565 kb on + strand, within BT0586
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with 5-Fluorouracil 0.2 mM remove 720,741 - BT0583 0.29 +0.3 720,786 - BT0583 0.33 +1.4 720,802 + BT0583 0.35 -0.2 720,803 - BT0583 0.35 -0.2 720,865 + BT0583 0.41 -2.4 720,866 - BT0583 0.41 +0.8 720,869 - BT0583 0.41 +0.8 720,896 + BT0583 0.43 -0.2 720,903 + BT0583 0.44 -1.2 720,920 + BT0583 0.46 -3.7 720,921 - BT0583 0.46 +1.4 720,939 - BT0583 0.47 -1.2 721,094 - BT0583 0.62 +0.8 721,190 - BT0583 0.70 +1.0 721,276 + BT0583 0.78 -1.6 721,280 + BT0583 0.79 +3.0 721,280 + BT0583 0.79 +0.5 721,285 + BT0583 0.79 +1.8 721,366 + BT0583 0.86 -1.9 721,682 - -0.2 721,910 - BT0584 0.24 +0.4 722,208 + BT0584 0.54 -0.2 722,345 + BT0584 0.68 +2.1 722,345 + BT0584 0.68 +0.7 722,436 - BT0584 0.77 -1.2 722,465 + BT0584 0.80 +0.8 722,516 - BT0584 0.85 -0.2 722,582 - -1.2 722,785 - BT0585 0.19 +3.6 722,869 + BT0585 0.36 -2.0 723,067 + BT0585 0.75 -0.4 723,164 + -0.2 723,234 - -0.5 723,234 - +1.8 723,247 - -2.3 723,247 - +2.0 723,247 - +3.4 723,287 - -1.0 723,330 - -0.2 723,353 + -2.8 723,407 - BT0586 0.14 -2.7 723,473 - BT0586 0.23 +2.4 723,523 + BT0586 0.30 -0.8 723,523 + BT0586 0.30 +2.1 723,523 + BT0586 0.30 -0.2 723,525 + BT0586 0.31 +2.0 723,526 - BT0586 0.31 +3.1 723,565 + BT0586 0.37 -2.2
Or see this region's nucleotide sequence