Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0151

Experiment: BHIS with 5-Fluorouracil 0.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT0150 and BT0151 are separated by 97 nucleotidesBT0151 and BT0152 are separated by 26 nucleotides BT0150: BT0150 - putative ferric aerobactin receptor (NCBI ptt file), at 153,863 to 156,241 BT0150 BT0151: BT0151 - hypothetical protein (NCBI ptt file), at 156,339 to 156,773 BT0151 BT0152: BT0152 - acetyl esterase (acetylxylosidase) (NCBI ptt file), at 156,800 to 157,618 BT0152 Position (kb) 156 157Strain fitness (log2 ratio) -2 -1 0 1 2 3at 155.412 kb on + strand, within BT0150at 155.690 kb on + strand, within BT0150at 155.703 kb on + strand, within BT0150at 155.703 kb on + strand, within BT0150at 155.785 kb on - strand, within BT0150at 155.834 kb on + strand, within BT0150at 155.945 kb on + strand, within BT0150at 155.953 kb on + strand, within BT0150at 155.953 kb on + strand, within BT0150at 156.197 kb on + strandat 156.244 kb on + strandat 156.244 kb on + strandat 156.365 kb on + strandat 156.366 kb on - strandat 156.600 kb on - strand, within BT0151at 156.698 kb on + strand, within BT0151at 156.699 kb on - strand, within BT0151at 156.781 kb on + strandat 156.788 kb on - strandat 156.788 kb on - strandat 156.792 kb on + strandat 156.822 kb on + strandat 156.880 kb on - strandat 156.921 kb on + strand, within BT0152at 156.958 kb on + strand, within BT0152at 157.065 kb on + strand, within BT0152at 157.270 kb on + strand, within BT0152at 157.270 kb on + strand, within BT0152at 157.292 kb on - strand, within BT0152at 157.305 kb on + strand, within BT0152at 157.306 kb on - strand, within BT0152at 157.390 kb on + strand, within BT0152at 157.391 kb on - strand, within BT0152at 157.391 kb on - strand, within BT0152at 157.395 kb on + strand, within BT0152at 157.395 kb on + strand, within BT0152at 157.396 kb on - strand, within BT0152at 157.438 kb on + strand, within BT0152at 157.480 kb on + strand, within BT0152at 157.560 kb on - strandat 157.601 kb on - strandat 157.668 kb on + strandat 157.668 kb on + strandat 157.669 kb on - strandat 157.676 kb on + strandat 157.690 kb on + strandat 157.695 kb on + strandat 157.695 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction BHIS with 5-Fluorouracil 0.2 mM
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155,412 + BT0150 0.65 +0.5
155,690 + BT0150 0.77 +2.7
155,703 + BT0150 0.77 -0.5
155,703 + BT0150 0.77 -2.0
155,785 - BT0150 0.81 -1.3
155,834 + BT0150 0.83 -1.7
155,945 + BT0150 0.88 -2.4
155,953 + BT0150 0.88 +0.6
155,953 + BT0150 0.88 -0.1
156,197 + +0.5
156,244 + +2.9
156,244 + -0.1
156,365 + +0.9
156,366 - -1.1
156,600 - BT0151 0.60 +2.5
156,698 + BT0151 0.83 -2.4
156,699 - BT0151 0.83 +1.3
156,781 + +2.1
156,788 - +3.5
156,788 - -0.1
156,792 + +2.1
156,822 + -1.2
156,880 - +0.6
156,921 + BT0152 0.15 -1.7
156,958 + BT0152 0.19 -0.1
157,065 + BT0152 0.32 -2.4
157,270 + BT0152 0.57 +0.9
157,270 + BT0152 0.57 -1.1
157,292 - BT0152 0.60 -1.4
157,305 + BT0152 0.62 -0.1
157,306 - BT0152 0.62 -1.7
157,390 + BT0152 0.72 -1.3
157,391 - BT0152 0.72 -0.8
157,391 - BT0152 0.72 -1.5
157,395 + BT0152 0.73 +0.9
157,395 + BT0152 0.73 -1.5
157,396 - BT0152 0.73 -0.1
157,438 + BT0152 0.78 -1.1
157,480 + BT0152 0.83 -2.4
157,560 - -0.7
157,601 - +3.4
157,668 + -0.1
157,668 + -0.1
157,669 - +1.9
157,676 + -0.9
157,690 + -1.1
157,695 + +0.1
157,695 + -1.7

Or see this region's nucleotide sequence