Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03321

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,501,133	+		CCNA_03320	0.71	-0.2
3,501,134	+		CCNA_03320	0.71	+0.6
3,501,152	-		CCNA_03320	0.71	+0.2
3,501,154	+		CCNA_03320	0.71	+0.2
3,501,162	-		CCNA_03320	0.72	-0.2
3,501,183	+		CCNA_03320	0.72	+0.6
3,501,191	-		CCNA_03320	0.73	-0.4
3,501,192	+		CCNA_03320	0.73	-1.7
3,501,201	-		CCNA_03320	0.73	-1.0
3,501,271	+		CCNA_03320	0.75	-2.7
3,501,286	+		CCNA_03320	0.76	+0.2
3,501,321	+		CCNA_03320	0.77	+0.1
3,501,378	-		CCNA_03320	0.78	-0.3
3,501,380	-		CCNA_03320	0.78	+0.2
3,501,380	-		CCNA_03320	0.78	+0.6
3,501,380	-		CCNA_03320	0.78	+0.5
3,501,380	-		CCNA_03320	0.78	-0.2
3,501,380	-		CCNA_03320	0.78	+0.4
3,501,380	-		CCNA_03320	0.78	-0.2
3,501,380	-		CCNA_03320	0.78	-1.6
3,501,380	-		CCNA_03320	0.78	+1.5
3,501,420	+		CCNA_03320	0.80	-0.6
3,501,468	+		CCNA_03320	0.81	+0.4
3,501,471	+		CCNA_03320	0.81	+0.8
3,501,499	-		CCNA_03320	0.82	-0.8
3,501,499	-		CCNA_03320	0.82	+0.4
3,501,535	-		CCNA_03320	0.83	+1.0
3,501,564	+		CCNA_03320	0.84	-0.3
3,501,566	+		CCNA_03320	0.84	-0.1
3,501,590	+		CCNA_03320	0.85	+0.7
3,501,596	+		CCNA_03320	0.85	-0.9
3,501,596	+		CCNA_03320	0.85	-1.1
3,501,604	-		CCNA_03320	0.85	-1.4
3,501,604	-		CCNA_03320	0.85	-0.9
3,501,604	-		CCNA_03320	0.85	+0.2
3,501,687	-		CCNA_03320	0.88	+0.1
3,501,687	-		CCNA_03320	0.88	-0.1
3,501,690	+		CCNA_03320	0.88	+0.5
3,501,697	+		CCNA_03320	0.88	+0.8
3,501,705	-		CCNA_03320	0.88	+2.7
3,501,720	-		CCNA_03320	0.89	+0.1
3,501,728	+		CCNA_03320	0.89	-0.2
3,501,735	+		CCNA_03320	0.89	+0.4
3,501,735	+		CCNA_03320	0.89	+0.3
3,501,735	+		CCNA_03320	0.89	-0.3
3,501,748	-		CCNA_03320	0.90	-0.4
3,501,749	+		CCNA_03320	0.90	-0.5
3,501,756	-				+2.0
3,501,837	-				-0.1
3,501,846	+				-0.6
3,501,863	+				+0.1
3,501,884	-				+0.1
3,501,903	-				+0.9
3,501,914	-				-0.7
3,501,925	+				-1.6
3,501,925	+				+1.2
3,501,925	+				-0.0
3,501,933	-				+0.3
3,501,933	-				-0.1
3,501,933	-				+0.1
3,501,933	-				+0.2
3,501,933	-				-0.5
3,501,933	-				-0.1
3,501,933	-				-0.5
3,501,933	-				-0.3
3,501,988	-				-0.1
3,501,988	-				+0.3
3,502,003	+				-0.5
3,502,045	-				-0.5
3,502,048	+				+0.6
3,502,056	-				-0.1
3,502,072	+				+0.7
3,502,085	-				+0.0
3,502,100	-				+0.0
3,502,125	+				-0.2
3,502,160	-		CCNA_03321	0.12	-0.0
3,502,174	-		CCNA_03321	0.16	-0.9
3,502,174	-		CCNA_03321	0.16	-2.6
3,502,183	+		CCNA_03321	0.19	-3.3
3,502,199	-		CCNA_03321	0.23	-1.1
3,502,200	+		CCNA_03321	0.23	-2.8
3,502,228	+		CCNA_03321	0.31	-2.7
3,502,261	+		CCNA_03321	0.40	-2.0
3,502,261	+		CCNA_03321	0.40	-3.1
3,502,269	-		CCNA_03321	0.42	-2.7
3,502,302	-		CCNA_03321	0.51	-3.2
3,502,321	+		CCNA_03321	0.56	-3.0
3,502,366	+		CCNA_03321	0.68	-2.0
3,502,374	-		CCNA_03321	0.70	-2.4
3,502,374	-		CCNA_03321	0.70	-2.5
3,502,374	-		CCNA_03321	0.70	-2.4
3,502,409	+		CCNA_03321	0.80	-1.5
3,502,417	-		CCNA_03321	0.82	-2.4
3,502,425	-		CCNA_03321	0.84	-0.8
3,502,443	-		CCNA_03321	0.89	-1.9
3,502,507	-				+0.0
3,502,521	-				-0.7
3,502,522	-				+0.5
3,502,523	+				+0.7
3,502,534	-				-1.6
3,502,568	+				-1.7
3,502,568	-				+0.6
3,502,570	-				+0.9
3,502,651	+				+0.3
3,502,651	+				+0.4
3,502,651	+				-2.0
3,502,651	+				-0.9
3,502,659	-				-0.4
3,502,659	-				+1.9
3,502,675	+				-2.1
3,502,688	+				-0.2
3,502,714	-				-0.1
3,502,719	-				-0.3
3,502,765	-				-0.0
3,502,773	+				+0.1
3,502,812	+		CCNA_03322	0.12	-0.1
3,502,830	-		CCNA_03322	0.13	+0.4
3,502,855	+		CCNA_03322	0.14	-0.1
3,502,855	-		CCNA_03322	0.14	+0.1
3,502,863	-		CCNA_03322	0.15	+0.3
3,502,869	+		CCNA_03322	0.15	-1.0
3,502,882	+		CCNA_03322	0.16	+1.6
3,502,882	+		CCNA_03322	0.16	+0.6
3,502,890	-		CCNA_03322	0.17	+0.2
3,502,946	+		CCNA_03322	0.20	+0.2
3,502,957	-		CCNA_03322	0.21	-0.6
3,502,977	+		CCNA_03322	0.22	-0.4
3,502,985	-		CCNA_03322	0.23	+0.1
3,502,985	-		CCNA_03322	0.23	+0.2
3,502,985	-		CCNA_03322	0.23	+0.7
3,503,040	+		CCNA_03322	0.26	+0.3
3,503,053	-		CCNA_03322	0.27	+0.6
3,503,064	-				+0.7
3,503,127	-		CCNA_03322	0.31	+0.6
3,503,170	-		CCNA_03322	0.34	+0.0
3,503,254	-				+0.1
3,503,263	+		CCNA_03322	0.40	+0.9
3,503,264	-		CCNA_03322	0.40	+1.4
3,503,268	+		CCNA_03322	0.40	+0.1
3,503,268	+		CCNA_03322	0.40	+0.7
3,503,275	+		CCNA_03322	0.41	+0.3
3,503,276	-		CCNA_03322	0.41	+0.6
3,503,292	+		CCNA_03322	0.42	-0.1
3,503,300	-		CCNA_03322	0.42	+0.2
3,503,300	-		CCNA_03322	0.42	+0.1
3,503,305	+		CCNA_03322	0.43	-0.6
3,503,313	-		CCNA_03322	0.43	+0.2
3,503,340	+		CCNA_03322	0.45	-1.2
3,503,340	+		CCNA_03322	0.45	+0.7
3,503,348	-		CCNA_03322	0.45	+0.3
3,503,348	-		CCNA_03322	0.45	-1.7
3,503,369	+		CCNA_03322	0.47	+0.2
3,503,370	-		CCNA_03322	0.47	+0.8
3,503,386	+		CCNA_03322	0.48	-0.5
3,503,388	-		CCNA_03322	0.48	+0.5
3,503,398	-		CCNA_03322	0.49	+0.9
3,503,416	-		CCNA_03322	0.50	+0.7
3,503,423	+		CCNA_03322	0.50	+0.3
3,503,431	-		CCNA_03322	0.51	+0.3
3,503,438	+		CCNA_03322	0.51	-0.0
3,503,472	-		CCNA_03322	0.53	+0.7
3,503,481	+		CCNA_03322	0.54	-0.8