Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03238

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,401,128	-				+1.3
3,401,198	-		CCNA_03236	0.10	+0.0
3,401,199	+		CCNA_03236	0.10	-0.1
3,401,218	+		CCNA_03236	0.12	-0.5
3,401,225	+		CCNA_03236	0.13	+0.4
3,401,257	-		CCNA_03236	0.17	-0.2
3,401,275	+		CCNA_03236	0.19	-0.3
3,401,275	-		CCNA_03236	0.19	-0.4
3,401,282	-		CCNA_03236	0.20	-0.3
3,401,283	+		CCNA_03236	0.20	-0.2
3,401,283	+		CCNA_03236	0.20	+1.7
3,401,283	+		CCNA_03236	0.20	-0.1
3,401,283	-		CCNA_03236	0.20	+0.4
3,401,291	-		CCNA_03236	0.21	-0.1
3,401,291	-		CCNA_03236	0.21	+0.0
3,401,291	-		CCNA_03236	0.21	-1.2
3,401,296	-		CCNA_03236	0.21	-0.5
3,401,312	-		CCNA_03236	0.23	+0.7
3,401,332	-		CCNA_03236	0.25	-0.6
3,401,337	+		CCNA_03236	0.26	-1.8
3,401,337	+		CCNA_03236	0.26	-0.9
3,401,337	+		CCNA_03236	0.26	-0.6
3,401,345	-		CCNA_03236	0.27	-1.5
3,401,345	-		CCNA_03236	0.27	+0.6
3,401,390	-		CCNA_03236	0.32	-0.2
3,401,457	+		CCNA_03236	0.40	-0.4
3,401,531	+		CCNA_03236	0.48	-0.4
3,401,540	-		CCNA_03236	0.49	+0.9
3,401,552	+		CCNA_03236	0.51	-0.4
3,401,557	+		CCNA_03236	0.51	-0.5
3,401,562	+		CCNA_03236	0.52	+0.3
3,401,562	+		CCNA_03236	0.52	-1.5
3,401,562	+		CCNA_03236	0.52	-0.4
3,401,570	-		CCNA_03236	0.53	-0.3
3,401,570	-		CCNA_03236	0.53	-0.2
3,401,570	-		CCNA_03236	0.53	+0.1
3,401,631	+		CCNA_03236	0.60	-0.0
3,401,639	-		CCNA_03236	0.61	-0.5
3,401,681	+		CCNA_03236	0.65	-1.4
3,401,696	-		CCNA_03236	0.67	-0.1
3,401,705	+		CCNA_03236	0.68	+1.4
3,401,709	-		CCNA_03236	0.68	-0.4
3,401,709	-				+0.7
3,401,709	-		CCNA_03236	0.68	-0.6
3,401,713	-		CCNA_03236	0.69	-0.9
3,401,713	-		CCNA_03236	0.69	-0.1
3,401,747	-		CCNA_03236	0.73	-0.4
3,401,766	-		CCNA_03236	0.75	+0.5
3,401,766	-		CCNA_03236	0.75	+0.4
3,401,840	+		CCNA_03236	0.83	+1.0
3,401,848	-		CCNA_03236	0.84	-1.9
3,401,850	+		CCNA_03236	0.85	+0.2
3,401,910	-				-0.9
3,401,939	-				+1.0
3,402,086	-				-0.9
3,402,157	-				-0.1
3,402,157	-				-0.1
3,402,162	-				-0.8
3,402,191	+				-0.5
3,402,208	+				-1.3
3,402,213	+				+0.4
3,402,213	+				-0.4
3,402,216	-				+0.4
3,402,216	-				-0.7
3,402,216	-				-2.4
3,402,216	-				-0.8
3,402,216	-				-0.9
3,402,221	-		CCNA_03238	0.10	-2.1
3,402,378	-		CCNA_03238	0.27	-0.3
3,402,386	+		CCNA_03238	0.28	+1.0
3,402,386	+		CCNA_03238	0.28	-0.5
3,402,386	+		CCNA_03238	0.28	-1.3
3,402,386	+		CCNA_03238	0.28	-0.5
3,402,386	+		CCNA_03238	0.28	-1.5
3,402,386	+		CCNA_03238	0.28	+0.3
3,402,386	+		CCNA_03238	0.28	-1.1
3,402,394	-		CCNA_03238	0.29	-1.3
3,402,394	-		CCNA_03238	0.29	-0.7
3,402,394	-		CCNA_03238	0.29	-2.3
3,402,394	-		CCNA_03238	0.29	-1.0
3,402,394	-		CCNA_03238	0.29	-0.4
3,402,394	-		CCNA_03238	0.29	-0.4
3,402,394	-		CCNA_03238	0.29	-0.6
3,402,394	-		CCNA_03238	0.29	-0.5
3,402,394	-		CCNA_03238	0.29	-0.4
3,402,394	-		CCNA_03238	0.29	+2.3
3,402,394	-		CCNA_03238	0.29	-0.8
3,402,420	+		CCNA_03238	0.32	-0.8
3,402,420	+		CCNA_03238	0.32	-0.4
3,402,420	+		CCNA_03238	0.32	-0.8
3,402,428	-		CCNA_03238	0.33	-0.8
3,402,428	-		CCNA_03238	0.33	-0.3
3,402,428	-		CCNA_03238	0.33	+0.2
3,402,428	-		CCNA_03238	0.33	-0.1
3,402,428	-		CCNA_03238	0.33	-1.0
3,402,428	-		CCNA_03238	0.33	-0.6
3,402,438	-		CCNA_03238	0.34	+0.3
3,402,455	-		CCNA_03238	0.36	-0.2
3,402,457	+		CCNA_03238	0.36	-0.3
3,402,457	+		CCNA_03238	0.36	-1.5
3,402,457	+		CCNA_03238	0.36	-1.8
3,402,465	-		CCNA_03238	0.37	+1.0
3,402,465	-		CCNA_03238	0.37	+0.2
3,402,465	-		CCNA_03238	0.37	-2.3
3,402,465	-		CCNA_03238	0.37	-1.2
3,402,467	+		CCNA_03238	0.37	-0.9
3,402,467	+		CCNA_03238	0.37	-1.2
3,402,467	+		CCNA_03238	0.37	-1.9
3,402,475	-		CCNA_03238	0.38	-2.2
3,402,475	-		CCNA_03238	0.38	+1.7
3,402,475	-		CCNA_03238	0.38	-0.2
3,402,488	-		CCNA_03238	0.39	-0.5
3,402,498	-		CCNA_03238	0.40	-0.8
3,402,503	-		CCNA_03238	0.41	+0.7
3,402,520	-		CCNA_03238	0.43	+0.3
3,402,520	-		CCNA_03238	0.43	+1.1
3,402,552	+		CCNA_03238	0.46	-1.3
3,402,575	+		CCNA_03238	0.49	+0.1
3,402,578	-		CCNA_03238	0.49	+1.5
3,402,578	-		CCNA_03238	0.49	-0.6
3,402,638	-		CCNA_03238	0.55	-2.3
3,402,649	+		CCNA_03238	0.57	+0.6
3,402,674	+		CCNA_03238	0.59	+0.2
3,402,674	-		CCNA_03238	0.59	-1.3
3,402,674	-		CCNA_03238	0.59	-0.9
3,402,679	+		CCNA_03238	0.60	-1.5
3,402,687	-		CCNA_03238	0.61	-0.0
3,402,692	+		CCNA_03238	0.61	-2.6
3,402,728	+		CCNA_03238	0.65	+0.7
3,402,728	+		CCNA_03238	0.65	-0.2
3,402,730	-		CCNA_03238	0.65	-1.3
3,402,735	-		CCNA_03238	0.66	-1.6
3,402,736	-		CCNA_03238	0.66	-0.5
3,402,751	+		CCNA_03238	0.68	-1.8
3,402,787	+		CCNA_03238	0.72	-0.0
3,402,794	-		CCNA_03238	0.72	-1.7
3,402,795	-		CCNA_03238	0.73	-0.6
3,402,799	+		CCNA_03238	0.73	-0.1
3,402,807	-		CCNA_03238	0.74	-1.4
3,402,842	-		CCNA_03238	0.78	-0.5
3,402,868	+		CCNA_03238	0.80	+0.1
3,402,901	-		CCNA_03238	0.84	+2.7
3,402,929	+		CCNA_03238	0.87	-1.5
3,402,937	-		CCNA_03238	0.88	+0.6
3,402,938	+		CCNA_03238	0.88	-1.1
3,402,953	+		CCNA_03238	0.90	+0.4
3,402,961	-				+0.1
3,402,966	-				+0.6
3,402,968	+				+1.1
3,402,973	+				+0.3
3,402,981	-				-0.4
3,403,007	+				+0.2
3,403,007	+				+1.4
3,403,027	-				-0.8
3,403,032	-				-0.9
3,403,042	+				-0.7
3,403,042	+				-0.7
3,403,050	-				-0.6
3,403,068	-				+0.4
3,403,084	-				-0.4
3,403,105	-				-0.2
3,403,115	-				-0.7
3,403,172	+				-0.4
3,403,172	+				-0.1
3,403,172	+				+1.3
3,403,172	+				-1.8
3,403,173	+				+0.7
3,403,180	-				+0.5
3,403,230	+				+0.5
3,403,232	+				-0.2
3,403,232	+				-0.2
3,403,232	+				-0.1
3,403,238	-				-0.5
3,403,238	-				-0.2
3,403,292	-		CCNA_03239	0.11	+0.5
3,403,301	-		CCNA_03239	0.11	+1.0
3,403,303	-		CCNA_03239	0.12	+0.3
3,403,338	+		CCNA_03239	0.15	-0.5
3,403,369	-		CCNA_03239	0.18	+0.7
3,403,376	-		CCNA_03239	0.18	+0.5
3,403,400	-		CCNA_03239	0.20	+0.7
3,403,413	+		CCNA_03239	0.21	+0.1
3,403,437	+		CCNA_03239	0.24	-1.3
3,403,445	-		CCNA_03239	0.24	-1.3
3,403,447	+		CCNA_03239	0.25	+2.3
3,403,455	-		CCNA_03239	0.25	+0.5
3,403,463	-		CCNA_03239	0.26	-2.0
3,403,490	+		CCNA_03239	0.28	-1.7
3,403,549	+		CCNA_03239	0.34	-0.6
3,403,554	+		CCNA_03239	0.34	-1.6
3,403,589	+		CCNA_03239	0.37	-1.8
3,403,638	+		CCNA_03239	0.42	+0.7
3,403,641	-		CCNA_03239	0.42	-0.2
3,403,646	-		CCNA_03239	0.43	+1.9
3,403,646	-		CCNA_03239	0.43	-3.4
3,403,646	-		CCNA_03239	0.43	-0.0
3,403,646	-		CCNA_03239	0.43	+0.3
3,403,646	-		CCNA_03239	0.43	-0.5
3,403,648	+		CCNA_03239	0.43	+0.5
3,403,703	+		CCNA_03239	0.48	-0.9
3,403,711	-		CCNA_03239	0.48	+1.2
3,403,711	-		CCNA_03239	0.48	-0.1
3,403,711	-		CCNA_03239	0.48	+0.3
3,403,724	-		CCNA_03239	0.50	-2.1
3,403,729	+		CCNA_03239	0.50	-1.0
3,403,732	-		CCNA_03239	0.50	-1.6
3,403,740	+		CCNA_03239	0.51	-1.4
3,403,740	+		CCNA_03239	0.51	-1.0
3,403,740	+		CCNA_03239	0.51	+0.6
3,403,740	+		CCNA_03239	0.51	-0.5
3,403,748	-		CCNA_03239	0.52	-2.2
3,403,748	-		CCNA_03239	0.52	+0.0
3,403,763	-		CCNA_03239	0.53	-0.3
3,403,787	+		CCNA_03239	0.55	-1.3
3,403,788	+		CCNA_03239	0.55	-1.0
3,403,788	+		CCNA_03239	0.55	+0.1
3,403,788	+		CCNA_03239	0.55	-1.8
3,403,796	-		CCNA_03239	0.56	+0.1
3,403,796	-		CCNA_03239	0.56	+1.7
3,403,796	-		CCNA_03239	0.56	-0.1
3,403,796	-		CCNA_03239	0.56	-1.1
3,403,796	-		CCNA_03239	0.56	+2.7
3,403,796	-		CCNA_03239	0.56	+0.4
3,403,796	-		CCNA_03239	0.56	+1.4
3,403,796	-		CCNA_03239	0.56	+2.4
3,403,796	-		CCNA_03239	0.56	-1.2
3,403,796	-		CCNA_03239	0.56	-0.6
3,403,796	-		CCNA_03239	0.56	-1.5
3,403,802	-		CCNA_03239	0.57	+1.1
3,403,818	-		CCNA_03239	0.58	-0.3
3,403,836	-		CCNA_03239	0.60	-0.3
3,403,841	-		CCNA_03239	0.60	+0.3
3,403,841	-		CCNA_03239	0.60	+0.8
3,403,841	-		CCNA_03239	0.60	+1.0
3,403,873	-		CCNA_03239	0.63	+0.0
3,403,941	-		CCNA_03239	0.69	-1.1
3,403,951	-		CCNA_03239	0.70	-0.3