Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01894

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
2,034,928	-		CCNA_01892	0.76	-3.0
2,034,986	+		CCNA_01892	0.80	-0.2
2,034,994	-		CCNA_01892	0.80	-0.5
2,035,078	+		CCNA_01892	0.85	-0.4
2,035,086	-		CCNA_01892	0.86	-1.3
2,035,124	-		CCNA_01892	0.88	+1.0
2,035,124	-		CCNA_01892	0.88	-0.0
2,035,215	+				-0.0
2,035,249	+				-0.6
2,035,249	+				-0.1
2,035,257	-				+0.2
2,035,257	-				-0.7
2,035,281	+				+0.8
2,035,314	+				-1.4
2,035,328	-				-0.5
2,035,445	+		CCNA_01893	0.20	-0.4
2,035,453	-		CCNA_01893	0.22	-0.0
2,035,464	+		CCNA_01893	0.24	-0.5
2,035,464	+		CCNA_01893	0.24	+1.5
2,035,464	+		CCNA_01893	0.24	+1.8
2,035,478	+		CCNA_01893	0.27	+1.1
2,035,505	+		CCNA_01893	0.31	+0.2
2,035,513	-		CCNA_01893	0.33	-1.1
2,035,513	-		CCNA_01893	0.33	-0.8
2,035,513	-		CCNA_01893	0.33	+0.2
2,035,557	+		CCNA_01893	0.41	-0.7
2,035,631	+		CCNA_01893	0.55	-1.7
2,035,639	-		CCNA_01893	0.56	-0.7
2,035,686	-		CCNA_01893	0.65	-0.5
2,035,699	-		CCNA_01893	0.67	-1.5
2,035,700	-		CCNA_01893	0.67	-0.2
2,035,700	-		CCNA_01893	0.67	+0.4
2,035,846	+				-0.4
2,035,846	+				+0.1
2,035,854	-				-0.9
2,035,857	+				-1.4
2,035,865	-				-1.8
2,035,877	+				+0.0
2,035,877	+				-0.3
2,035,881	+				-1.1
2,035,912	-				-0.0
2,035,932	-				+0.3
2,035,950	+				+0.9
2,035,980	+				-0.0
2,035,980	+				-0.6
2,035,980	+				-1.7
2,035,980	+				-0.7
2,035,988	-				-0.7
2,035,988	-				-0.8
2,035,988	-				+0.2
2,035,990	-				+0.2
2,036,062	+				+0.8
2,036,070	-				+1.5
2,036,070	-				-0.7
2,036,106	+		CCNA_01894	0.11	-0.3
2,036,119	-		CCNA_01894	0.12	+1.4
2,036,129	-				-0.9
2,036,129	-		CCNA_01894	0.12	-0.6
2,036,129	-		CCNA_01894	0.12	+0.8
2,036,129	-		CCNA_01894	0.12	-1.0
2,036,142	-		CCNA_01894	0.13	+0.1
2,036,147	-		CCNA_01894	0.14	-0.5
2,036,151	+		CCNA_01894	0.14	-1.3
2,036,159	-		CCNA_01894	0.14	-0.7
2,036,168	+		CCNA_01894	0.15	-1.9
2,036,177	+		CCNA_01894	0.15	-1.6
2,036,185	-		CCNA_01894	0.16	-0.8
2,036,216	+		CCNA_01894	0.18	+1.0
2,036,270	+		CCNA_01894	0.21	-0.0
2,036,288	-		CCNA_01894	0.22	-0.0
2,036,300	+		CCNA_01894	0.23	+0.2
2,036,306	+		CCNA_01894	0.23	-0.4
2,036,314	-		CCNA_01894	0.24	-2.0
2,036,329	+		CCNA_01894	0.25	-0.8
2,036,344	-		CCNA_01894	0.26	-0.5
2,036,345	-		CCNA_01894	0.26	+1.0
2,036,380	-		CCNA_01894	0.28	-0.6
2,036,380	-		CCNA_01894	0.28	-0.2
2,036,522	-		CCNA_01894	0.37	-1.7
2,036,522	-		CCNA_01894	0.37	+0.2
2,036,532	-		CCNA_01894	0.37	+0.2
2,036,537	-		CCNA_01894	0.37	+1.0
2,036,579	+		CCNA_01894	0.40	-1.4
2,036,604	+		CCNA_01894	0.42	-1.2
2,036,604	+		CCNA_01894	0.42	-0.7
2,036,612	-		CCNA_01894	0.42	+0.1
2,036,612	-		CCNA_01894	0.42	+1.8
2,036,690	+		CCNA_01894	0.47	-0.3
2,036,710	+		CCNA_01894	0.48	-1.4
2,036,716	+		CCNA_01894	0.48	-1.2
2,036,716	+		CCNA_01894	0.48	-0.2
2,036,724	-		CCNA_01894	0.49	-0.4
2,036,755	-		CCNA_01894	0.51	-0.4
2,036,760	+		CCNA_01894	0.51	-0.5
2,036,766	-		CCNA_01894	0.51	-1.7
2,036,786	+		CCNA_01894	0.53	+0.5
2,036,806	+		CCNA_01894	0.54	-0.7
2,036,814	-		CCNA_01894	0.54	-0.7
2,036,842	+		CCNA_01894	0.56	-0.2
2,036,842	+		CCNA_01894	0.56	+1.6
2,036,842	+		CCNA_01894	0.56	-0.4
2,036,850	-		CCNA_01894	0.57	-1.2
2,036,850	-				+0.8
2,036,852	+		CCNA_01894	0.57	-0.5
2,036,855	-		CCNA_01894	0.57	-0.3
2,036,855	-		CCNA_01894	0.57	+0.4
2,036,857	+		CCNA_01894	0.57	+1.5
2,036,857	+		CCNA_01894	0.57	-0.1
2,036,857	+		CCNA_01894	0.57	+2.2
2,036,865	-		CCNA_01894	0.58	+0.4
2,036,866	+		CCNA_01894	0.58	-0.2
2,036,875	+		CCNA_01894	0.58	+0.2
2,036,915	+		CCNA_01894	0.61	-1.5
2,036,919	-		CCNA_01894	0.61	+0.3
2,036,989	+		CCNA_01894	0.65	-0.8
2,036,989	+		CCNA_01894	0.65	-3.0
2,037,004	+		CCNA_01894	0.66	-0.4
2,037,005	+		CCNA_01894	0.66	-0.1
2,037,031	-		CCNA_01894	0.68	-1.4
2,037,096	-		CCNA_01894	0.72	-2.2
2,037,149	-		CCNA_01894	0.75	+2.8
2,037,159	+		CCNA_01894	0.76	-1.9
2,037,171	+		CCNA_01894	0.76	+0.2
2,037,226	+		CCNA_01894	0.80	-0.1
2,037,234	-		CCNA_01894	0.80	-2.0
2,037,236	+		CCNA_01894	0.80	+0.8
2,037,267	+		CCNA_01894	0.82	+0.2
2,037,275	-		CCNA_01894	0.83	-1.3
2,037,315	-		CCNA_01894	0.85	-2.1
2,037,337	-		CCNA_01894	0.86	-1.8
2,037,422	+				-1.3
2,037,422	+				-1.1
2,037,422	+				-1.8
2,037,422	+				-1.7
2,037,422	+				+2.8
2,037,429	+				-0.6
2,037,430	-				-1.2
2,037,442	-				+0.2
2,037,458	+				-0.5
2,037,479	+				-0.0
2,037,499	+				-0.1
2,037,504	+				-1.5
2,037,523	+				-0.5
2,037,523	+				-0.4
2,037,531	-				-0.4
2,037,532	+				+0.2
2,037,544	+				+1.1
2,037,544	+				-1.1
2,037,596	-				-0.4
2,037,633	+				-2.4
2,037,662	+				-0.9
2,037,687	+				-1.5
2,037,739	+				-1.8
2,037,739	+				-0.2
2,037,742	-				+1.2
2,037,742	-				-0.7
2,037,762	-				-1.4
2,037,793	+				-1.2
2,037,808	+		CCNA_01895	0.10	+1.1
2,037,816	-		CCNA_01895	0.11	-1.0
2,037,829	+		CCNA_01895	0.12	-1.3
2,037,839	+		CCNA_01895	0.13	+0.8
2,037,839	+		CCNA_01895	0.13	-0.0
2,037,886	-		CCNA_01895	0.16	+1.7
2,037,891	+		CCNA_01895	0.16	+0.3
2,037,937	+		CCNA_01895	0.19	-0.5
2,037,937	+		CCNA_01895	0.19	+0.2
2,037,947	+		CCNA_01895	0.20	-2.6
2,037,947	+		CCNA_01895	0.20	-0.2
2,037,955	-		CCNA_01895	0.21	+0.9
2,037,991	+		CCNA_01895	0.23	-1.5
2,038,027	-		CCNA_01895	0.26	-0.4
2,038,029	-		CCNA_01895	0.26	-0.7
2,038,040	+		CCNA_01895	0.27	+1.0
2,038,058	-		CCNA_01895	0.28	-0.6
2,038,128	+		CCNA_01895	0.33	-0.2
2,038,182	+		CCNA_01895	0.36	-0.3
2,038,182	+		CCNA_01895	0.36	-1.7
2,038,182	+		CCNA_01895	0.36	+0.6
2,038,188	+		CCNA_01895	0.37	+0.2
2,038,190	-		CCNA_01895	0.37	-0.9
2,038,275	+		CCNA_01895	0.43	-0.8
2,038,293	-		CCNA_01895	0.44	+0.1
2,038,332	-		CCNA_01895	0.47	-1.0
2,038,332	-		CCNA_01895	0.47	-0.7
2,038,338	-		CCNA_01895	0.47	-0.3
2,038,355	+		CCNA_01895	0.48	+1.2
2,038,355	+		CCNA_01895	0.48	-1.2
2,038,355	+		CCNA_01895	0.48	-0.1
2,038,355	+		CCNA_01895	0.48	+0.4
2,038,355	+		CCNA_01895	0.48	+0.2
2,038,355	+		CCNA_01895	0.48	+0.8
2,038,363	-		CCNA_01895	0.49	-1.4
2,038,406	+		CCNA_01895	0.52	-1.1
2,038,463	-		CCNA_01895	0.56	+1.6
2,038,556	-		CCNA_01895	0.62	-1.2