Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01220

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,345,518	-				+0.6
1,345,540	+				-0.7
1,345,541	+				-0.6
1,345,587	+				+0.7
1,345,610	-				-1.2
1,345,869	+		CCNA_01219	0.34	-1.5
1,345,924	+		CCNA_01219	0.40	-2.1
1,346,190	-		CCNA_01219	0.71	-1.6
1,346,223	+		CCNA_01219	0.74	-2.8
1,346,223	+		CCNA_01219	0.74	-2.3
1,346,260	+		CCNA_01219	0.79	-0.7
1,346,280	+		CCNA_01219	0.81	-0.2
1,346,350	-		CCNA_01219	0.89	+0.2
1,346,412	+				+0.3
1,346,418	+				+0.6
1,346,418	+				+0.2
1,346,418	+				+0.1
1,346,418	+				+0.4
1,346,418	+				+0.1
1,346,426	-				+0.2
1,346,426	-				-0.7
1,346,473	+				+0.1
1,346,515	+				-0.4
1,346,530	+				-0.8
1,346,550	+				-0.5
1,346,558	-				-2.0
1,346,578	+				-0.7
1,346,578	+				-0.2
1,346,588	-				+0.2
1,346,590	+				-1.2
1,346,590	+				-1.7
1,346,639	+		CCNA_01220	0.10	-1.5
1,346,647	-		CCNA_01220	0.11	-2.0
1,346,759	+		CCNA_01220	0.20	-0.4
1,346,767	-		CCNA_01220	0.21	-0.2
1,346,803	+		CCNA_01220	0.24	-0.8
1,346,846	-		CCNA_01220	0.27	-1.0
1,346,998	-		CCNA_01220	0.40	-0.7
1,347,038	-		CCNA_01220	0.43	+1.8
1,347,078	+		CCNA_01220	0.46	+1.5
1,347,108	-		CCNA_01220	0.49	-1.7
1,347,158	+		CCNA_01220	0.53	+0.8
1,347,251	-		CCNA_01220	0.60	-1.2
1,347,291	+		CCNA_01220	0.64	-1.4
1,347,291	+		CCNA_01220	0.64	-0.7
1,347,299	-		CCNA_01220	0.64	+0.1
1,347,314	-		CCNA_01220	0.66	+0.2
1,347,325	-		CCNA_01220	0.67	-1.3
1,347,526	+		CCNA_01220	0.83	-0.8
1,347,554	+		CCNA_01220	0.85	+2.8
1,347,614	-				-1.0
1,347,627	-				-1.9
1,347,648	-				-1.1
1,347,661	-				+0.2
1,347,685	+				-0.5
1,347,685	+				-0.9
1,347,693	-				-1.3
1,347,693	-				-0.0
1,347,705	+				-1.7
1,347,747	-				-1.4
1,347,754	+				-1.3
1,347,762	-		CCNA_01221	0.10	-0.0
1,347,821	+		CCNA_01221	0.33	-0.5
1,347,924	+		CCNA_01221	0.72	-1.6
1,347,924	+		CCNA_01221	0.72	-2.6
1,347,924	+		CCNA_01221	0.72	-0.0
1,347,932	-		CCNA_01221	0.75	-1.1
1,347,941	+		CCNA_01221	0.79	-1.5
1,347,949	-		CCNA_01221	0.82	-1.6
1,347,955	-		CCNA_01221	0.84	-2.4
1,347,963	+		CCNA_01221	0.87	-0.2
1,347,970	-				-2.5
1,347,980	+				-2.2
1,347,998	-				+2.8
1,347,998	-				+0.1
1,348,172	+		CCNA_01222	0.11	-1.3
1,348,193	+		CCNA_01222	0.14	-1.0
1,348,205	+		CCNA_01222	0.15	-0.7
1,348,206	+		CCNA_01222	0.15	-0.0
1,348,206	+		CCNA_01222	0.15	+0.2
1,348,214	-		CCNA_01222	0.16	-2.5
1,348,222	+		CCNA_01222	0.17	-0.0
1,348,230	-		CCNA_01222	0.18	-0.0
1,348,323	-		CCNA_01222	0.27	-3.4
1,348,333	-		CCNA_01222	0.28	-0.0
1,348,333	-		CCNA_01222	0.28	-3.1
1,348,366	-		CCNA_01222	0.32	-1.6
1,348,401	+		CCNA_01222	0.35	-1.8
1,348,459	+		CCNA_01222	0.42	-2.0
1,348,467	-		CCNA_01222	0.42	-0.9
1,348,525	-		CCNA_01222	0.48	-2.2
1,348,525	-		CCNA_01222	0.48	-0.9
1,348,527	+		CCNA_01222	0.49	-1.0
1,348,553	-		CCNA_01222	0.51	-0.7
1,348,553	-		CCNA_01222	0.51	-0.7
1,348,616	+		CCNA_01222	0.58	-1.3
1,348,662	+		CCNA_01222	0.63	-0.8
1,348,677	-		CCNA_01222	0.64	+1.2
1,348,717	-		CCNA_01222	0.69	-4.4