Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0414

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
462,897	-	trk1	DVU0413	0.36	-1.0
462,961	+	trk1	DVU0413	0.41	+0.3
462,969	-	trk1	DVU0413	0.42	-0.8
462,969	-	trk1	DVU0413	0.42	-0.8
462,969	-	trk1	DVU0413	0.42	+0.9
462,978	-	trk1	DVU0413	0.42	-0.5
462,996	+	trk1	DVU0413	0.44	-0.0
463,029	+	trk1	DVU0413	0.46	-0.1
463,072	-	trk1	DVU0413	0.49	-1.8
463,087	-	trk1	DVU0413	0.51	-0.2
463,145	+	trk1	DVU0413	0.55	-1.3
463,189	-	trk1	DVU0413	0.58	-0.0
463,302	+	trk1	DVU0413	0.67	+0.0
463,315	+	trk1	DVU0413	0.68	-1.5
463,344	-	trk1	DVU0413	0.70	+0.1
463,510	+	trk1	DVU0413	0.82	-0.1
463,601	+	trk1	DVU0413	0.89	+0.4
463,606	+	trk1	DVU0413	0.89	-0.4
463,614	-	trk1	DVU0413	0.90	+0.8
463,648	+				-0.7
463,653	+				+0.8
463,655	+				-0.7
463,661	-				-1.3
463,663	-				-0.9
463,678	-				+0.1
463,678	-				-0.3
463,740	-				+0.5
463,752	+				-0.2
463,757	+				-1.4
463,765	-				-0.9
463,826	-				-0.1
463,843	+				-0.8
463,926	+				+0.1
463,952	+				-0.8
464,004	-	tme	DVU0414	0.10	-1.5
464,034	+	tme	DVU0414	0.13	-0.5
464,037	-	tme	DVU0414	0.13	-1.1
464,063	-	tme	DVU0414	0.15	-1.2
464,099	+	tme	DVU0414	0.18	-1.1
464,107	-	tme	DVU0414	0.18	-1.3
464,157	+	tme	DVU0414	0.22	+0.7
464,157	+	tme	DVU0414	0.22	-0.7
464,157	+	tme	DVU0414	0.22	-0.1
464,157	+	tme	DVU0414	0.22	+0.0
464,373	-	tme	DVU0414	0.38	-0.2
464,386	-	tme	DVU0414	0.39	-0.5
464,420	-	tme	DVU0414	0.42	-2.4
464,435	-	tme	DVU0414	0.43	-0.2
464,519	-	tme	DVU0414	0.49	-0.1
464,520	-	tme	DVU0414	0.49	-0.5
464,580	-	tme	DVU0414	0.54	-0.6
464,715	-	tme	DVU0414	0.64	-0.9
464,751	+	tme	DVU0414	0.67	-0.2
464,751	+	tme	DVU0414	0.67	-1.1
464,751	+	tme	DVU0414	0.67	+0.8
464,759	-	tme	DVU0414	0.68	-0.2
464,759	-	tme	DVU0414	0.68	-0.0
464,766	-	tme	DVU0414	0.68	-0.3
464,873	-	tme	DVU0414	0.76	+0.2
464,879	+	tme	DVU0414	0.77	-0.1
464,930	-	tme	DVU0414	0.81	+0.5
464,996	-	tme	DVU0414	0.86	+0.8
464,996	-	tme	DVU0414	0.86	-0.9
465,008	+	tme	DVU0414	0.86	+1.3
465,115	-				+0.0
465,126	+				-1.0
465,134	-				+0.4
465,245	-				-1.2
465,245	-				-1.0
465,331	-				+2.3
465,495	+	pepA	DVU0415	0.16	+0.8
465,604	+	pepA	DVU0415	0.24	-1.9
465,606	+	pepA	DVU0415	0.24	+0.8
465,644	-	pepA	DVU0415	0.26	-1.0
465,660	+	pepA	DVU0415	0.27	+0.0
465,663	-	pepA	DVU0415	0.27	+1.0
465,675	+	pepA	DVU0415	0.28	-1.7
465,683	+	pepA	DVU0415	0.29	-1.0
465,685	+	pepA	DVU0415	0.29	-0.7
465,746	-	pepA	DVU0415	0.33	-1.7
465,747	-	pepA	DVU0415	0.33	-0.8
465,765	-	pepA	DVU0415	0.34	-1.0
465,798	+	pepA	DVU0415	0.36	-0.9
465,940	+	pepA	DVU0415	0.46	-0.9
465,969	-	pepA	DVU0415	0.48	-0.6
466,085	+	pepA	DVU0415	0.55	-0.4
466,129	+	pepA	DVU0415	0.58	-0.9