Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2643

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
2,757,517	-		DVU2641	0.64	-0.2
2,757,555	+		DVU2641	0.69	-0.3
2,757,561	+		DVU2641	0.70	-0.2
2,757,668	+		DVU2641	0.84	-0.6
2,757,676	-		DVU2641	0.85	-0.1
2,757,726	-				+0.1
2,757,736	-				+0.2
2,757,798	-				-0.2
2,757,803	-				-0.0
2,757,840	+				-0.9
2,757,848	-				-0.4
2,757,864	-				-0.4
2,757,864	-				-0.2
2,757,865	-				+0.6
2,757,881	+				+0.3
2,757,908	-		DVU2642	0.14	-0.6
2,757,997	-		DVU2642	0.34	-0.9
2,757,999	+		DVU2642	0.34	-1.1
2,757,999	-		DVU2642	0.34	+0.8
2,758,022	-		DVU2642	0.39	-0.0
2,758,024	-		DVU2642	0.40	-0.1
2,758,026	+		DVU2642	0.40	-0.2
2,758,027	+		DVU2642	0.40	-0.1
2,758,061	+		DVU2642	0.48	-0.2
2,758,098	+		DVU2642	0.56	-1.1
2,758,220	+		DVU2642	0.84	+0.0
2,758,243	+		DVU2642	0.89	-1.5
2,758,247	-				-0.4
2,758,294	-				+0.3
2,758,352	-				-1.0
2,758,357	-				-0.0
2,758,390	+				-1.9
2,758,441	-				-0.7
2,758,462	-				+0.1
2,758,471	+				-2.4
2,758,493	+				-0.8
2,758,530	+				+2.3
2,758,543	+				-1.8
2,758,696	+	htpG	DVU2643	0.12	-0.0
2,758,704	-	htpG	DVU2643	0.12	-1.8
2,758,753	+	htpG	DVU2643	0.15	-0.3
2,758,753	+	htpG	DVU2643	0.15	-1.4
2,758,876	+	htpG	DVU2643	0.21	-0.4
2,758,910	+	htpG	DVU2643	0.23	+1.5
2,758,955	-	htpG	DVU2643	0.25	-0.3
2,758,956	+	htpG	DVU2643	0.25	-0.6
2,758,956	+	htpG	DVU2643	0.25	-0.9
2,758,961	+	htpG	DVU2643	0.26	-0.0
2,758,964	-	htpG	DVU2643	0.26	-0.5
2,758,964	-	htpG	DVU2643	0.26	-0.5
2,759,131	+	htpG	DVU2643	0.34	-0.4
2,759,139	-	htpG	DVU2643	0.35	-0.9
2,759,243	+	htpG	DVU2643	0.40	-0.2
2,759,312	-	htpG	DVU2643	0.44	+0.1
2,759,312	-	htpG	DVU2643	0.44	-0.0
2,759,340	+	htpG	DVU2643	0.45	-0.2
2,759,340	+	htpG	DVU2643	0.45	+0.3
2,759,371	-	htpG	DVU2643	0.47	+0.3
2,759,413	+	htpG	DVU2643	0.49	-0.5
2,759,501	-	htpG	DVU2643	0.54	-0.9
2,759,568	-	htpG	DVU2643	0.57	-0.2
2,759,596	+	htpG	DVU2643	0.59	-0.1
2,759,604	-	htpG	DVU2643	0.59	-0.2
2,759,829	-	htpG	DVU2643	0.71	-1.3
2,759,864	+	htpG	DVU2643	0.73	-0.6
2,759,961	-	htpG	DVU2643	0.78	-0.6
2,760,010	+	htpG	DVU2643	0.80	+0.7
2,760,054	+	htpG	DVU2643	0.83	-0.6
2,760,099	-	htpG	DVU2643	0.85	-0.3
2,760,123	+	htpG	DVU2643	0.86	-0.2
2,760,139	+	htpG	DVU2643	0.87	-1.0
2,760,145	+	htpG	DVU2643	0.87	-0.5
2,760,150	+	htpG	DVU2643	0.88	+0.2
2,760,197	-				+0.0
2,760,298	+				+0.0
2,760,339	-				+0.2
2,760,360	+				-0.2
2,760,434	-				+0.6
2,760,538	+				-0.5
2,760,546	-				-0.0
2,760,630	+				+1.2
2,760,636	-				-0.0
2,760,735	+				-0.4
2,760,735	+				-0.3
2,760,742	+				-0.0
2,760,827	-				+1.1
2,760,881	+		DVU2644	0.14	+0.4
2,761,053	-		DVU2644	0.40	-0.2
2,761,122	-		DVU2644	0.50	-0.6
2,761,124	+		DVU2644	0.51	-0.3
2,761,124	+		DVU2644	0.51	-0.5
2,761,184	-		DVU2644	0.60	-0.8
2,761,192	-		DVU2644	0.61	+1.4
2,761,325	-		DVU2644	0.81	-0.5