Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01724
Experiment: PYE with CHIR-090 1 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | PYE with CHIR-090 1 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,850,421 | + | -0.1 | |||
| 1,850,454 | + | -0.3 | |||
| 1,850,454 | + | +0.5 | |||
| 1,850,456 | + | +0.5 | |||
| 1,850,462 | - | +1.8 | |||
| 1,850,503 | + | -1.2 | |||
| 1,850,526 | + | -0.4 | |||
| 1,850,569 | + | -1.4 | |||
| 1,850,623 | + | -2.3 | |||
| 1,850,653 | + | -1.1 | |||
| 1,850,743 | + | CCNA_01724 | 0.22 | -0.9 | |
| 1,850,812 | + | CCNA_01724 | 0.31 | -0.5 | |
| 1,850,974 | + | CCNA_01724 | 0.52 | +0.5 | |
| 1,851,244 | - | CCNA_01724 | 0.88 | -2.0 | |
| 1,851,244 | - | CCNA_01724 | 0.88 | -1.9 | |
| 1,851,250 | + | CCNA_01724 | 0.89 | -1.8 | |
| 1,851,250 | + | CCNA_01724 | 0.89 | -0.0 | |
| 1,851,250 | + | CCNA_01724 | 0.89 | -1.3 |
Or see this region's nucleotide sequence