Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0507
Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (60/30-60 mM) |
---|---|---|---|---|---|
remove | |||||
578,654 | - | +0.2 | |||
578,729 | - | -0.1 | |||
578,781 | - | DVU0506 | 0.15 | +0.0 | |
578,846 | + | DVU0506 | 0.21 | -1.3 | |
578,936 | - | DVU0506 | 0.30 | +0.6 | |
579,160 | + | DVU0506 | 0.53 | -1.4 | |
579,224 | + | DVU0506 | 0.59 | -0.1 | |
579,372 | + | DVU0506 | 0.74 | -0.4 | |
579,372 | + | DVU0506 | 0.74 | +2.5 | |
579,388 | + | DVU0506 | 0.76 | -0.9 | |
579,429 | - | DVU0506 | 0.80 | -1.2 | |
579,429 | - | DVU0506 | 0.80 | +0.8 | |
579,429 | - | DVU0506 | 0.80 | -0.6 | |
579,677 | + | +0.5 | |||
579,717 | - | DVU0507 | 0.23 | -1.2 | |
579,737 | + | DVU0507 | 0.30 | -0.3 | |
579,853 | + | DVU0507 | 0.70 | +0.7 | |
579,921 | - | -1.0 | |||
579,966 | - | -0.3 | |||
580,013 | - | -0.3 | |||
580,044 | + | -0.9 | |||
580,044 | + | -0.9 |
Or see this region's nucleotide sequence