Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2558

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
2,669,051	+	birA	DVU2557	0.39	+0.9
2,669,094	+	birA	DVU2557	0.43	-0.0
2,669,123	-	birA	DVU2557	0.46	-0.2
2,669,172	+	birA	DVU2557	0.51	+0.2
2,669,268	-	birA	DVU2557	0.61	-0.4
2,669,270	+	birA	DVU2557	0.61	-0.3
2,669,399	-	birA	DVU2557	0.74	-0.6
2,669,462	-	birA	DVU2557	0.80	-0.0
2,669,463	-	birA	DVU2557	0.80	+0.4
2,669,468	-	birA	DVU2557	0.81	-0.1
2,669,659	-				+0.0
2,669,671	+				+0.1
2,669,674	+				-0.3
2,669,681	-				-1.1
2,669,695	+				+0.5
2,669,710	+				-0.6
2,669,741	-				-0.1
2,669,799	-				+0.8
2,669,966	+				-0.8
2,669,974	+				-1.1
2,670,002	-	bioB	DVU2558	0.11	-0.4
2,670,029	+	bioB	DVU2558	0.14	-0.2
2,670,103	+	bioB	DVU2558	0.22	-1.8
2,670,153	+	bioB	DVU2558	0.28	-0.7
2,670,153	-	bioB	DVU2558	0.28	-0.2
2,670,304	-	bioB	DVU2558	0.44	-1.0
2,670,391	+	bioB	DVU2558	0.53	-0.2
2,670,399	-	bioB	DVU2558	0.54	-0.3
2,670,401	+	bioB	DVU2558	0.54	-0.0
2,670,404	-	bioB	DVU2558	0.55	-1.3
2,670,409	-	bioB	DVU2558	0.55	-0.0
2,670,450	-	bioB	DVU2558	0.59	-0.2
2,670,483	+	bioB	DVU2558	0.63	+1.5
2,670,646	-	bioB	DVU2558	0.80	-0.7
2,670,702	-	bioB	DVU2558	0.86	-1.8
2,670,718	-	bioB	DVU2558	0.88	-0.6
2,670,739	+				+0.6
2,670,776	+				+0.0
2,670,839	-				-0.2
2,670,858	-				-0.2
2,670,996	-	bioA	DVU2559	0.11	+1.5
2,671,126	+	bioA	DVU2559	0.19	-0.1
2,671,162	+	bioA	DVU2559	0.21	-0.4
2,671,231	-	bioA	DVU2559	0.25	+0.2
2,671,243	-	bioA	DVU2559	0.26	-0.1
2,671,243	-	bioA	DVU2559	0.26	+1.2
2,671,318	-	bioA	DVU2559	0.30	-0.2
2,671,323	-	bioA	DVU2559	0.31	-0.5
2,671,323	-	bioA	DVU2559	0.31	-0.2
2,671,411	-	bioA	DVU2559	0.36	+0.1
2,671,411	-	bioA	DVU2559	0.36	-0.3
2,671,421	+	bioA	DVU2559	0.37	-1.3
2,671,470	+	bioA	DVU2559	0.40	-0.7
2,671,470	+	bioA	DVU2559	0.40	-0.8
2,671,478	-	bioA	DVU2559	0.40	-1.0
2,671,502	+	bioA	DVU2559	0.42	+0.4
2,671,508	-	bioA	DVU2559	0.42	-1.2
2,671,815	-	bioA	DVU2559	0.61	+1.1