Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2539
Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (60/30-60 mM) |
---|---|---|---|---|---|
remove | |||||
2,651,462 | + | DVU2539 | 0.80 | -0.9 | |
2,651,479 | + | -0.2 | |||
2,651,529 | + | -0.2 | |||
2,651,551 | + | -0.3 | |||
2,651,559 | - | -1.1 | |||
2,651,595 | - | -1.8 | |||
2,651,611 | + | DVU2540 | 0.10 | +0.3 | |
2,651,617 | - | DVU2540 | 0.11 | -0.7 | |
2,651,634 | - | DVU2540 | 0.12 | +0.1 | |
2,651,634 | - | DVU2540 | 0.12 | -0.2 | |
2,651,720 | - | DVU2540 | 0.20 | +0.0 | |
2,651,732 | - | DVU2540 | 0.21 | -0.1 | |
2,651,742 | + | DVU2540 | 0.22 | -0.1 | |
2,651,778 | + | DVU2540 | 0.25 | +0.1 | |
2,651,811 | - | DVU2540 | 0.28 | -0.7 | |
2,651,829 | - | DVU2540 | 0.29 | -0.1 | |
2,651,843 | + | DVU2540 | 0.31 | +0.3 | |
2,651,870 | - | DVU2540 | 0.33 | -0.5 | |
2,651,920 | - | DVU2540 | 0.37 | -0.5 | |
2,651,946 | - | DVU2540 | 0.40 | +0.4 | |
2,651,948 | - | DVU2540 | 0.40 | +0.1 | |
2,651,957 | + | DVU2540 | 0.41 | -0.0 | |
2,652,009 | - | DVU2540 | 0.45 | -0.7 | |
2,652,091 | - | DVU2540 | 0.52 | +0.1 | |
2,652,139 | - | DVU2540 | 0.57 | -1.7 | |
2,652,165 | - | DVU2540 | 0.59 | -0.3 | |
2,652,186 | - | DVU2540 | 0.61 | +0.1 | |
2,652,202 | + | DVU2540 | 0.62 | -0.0 | |
2,652,225 | + | DVU2540 | 0.64 | -1.5 | |
2,652,225 | + | DVU2540 | 0.64 | -0.3 | |
2,652,241 | + | DVU2540 | 0.66 | +0.3 | |
2,652,283 | - | DVU2540 | 0.69 | +0.6 |
Or see this region's nucleotide sequence