Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2137

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
2,232,411	+		DVU2136	0.37	-0.1
2,232,411	+		DVU2136	0.37	+0.4
2,232,419	-		DVU2136	0.38	-0.1
2,232,446	-		DVU2136	0.40	-0.4
2,232,564	+		DVU2136	0.50	-1.1
2,232,572	-		DVU2136	0.51	-0.3
2,232,572	-		DVU2136	0.51	+0.2
2,232,572	-		DVU2136	0.51	-0.5
2,232,579	+		DVU2136	0.52	-0.2
2,232,587	-		DVU2136	0.52	-0.4
2,232,642	+		DVU2136	0.57	-1.6
2,232,650	+		DVU2136	0.58	+0.1
2,232,668	-		DVU2136	0.59	-0.0
2,232,730	-		DVU2136	0.64	-0.3
2,232,744	-		DVU2136	0.66	+0.2
2,232,746	+		DVU2136	0.66	+0.3
2,232,770	+		DVU2136	0.68	-0.8
2,232,841	-		DVU2136	0.74	-0.6
2,232,866	+		DVU2136	0.76	-0.8
2,232,881	-		DVU2136	0.77	-1.9
2,232,889	+		DVU2136	0.78	-0.6
2,232,895	-		DVU2136	0.78	-1.8
2,232,897	-		DVU2136	0.79	-1.1
2,232,929	+		DVU2136	0.81	+0.2
2,232,935	+		DVU2136	0.82	-0.0
2,233,035	+				-0.2
2,233,053	-				-0.4
2,233,092	-				+0.0
2,233,118	+				-1.0
2,233,222	+				-0.4
2,233,237	-				+0.1
2,233,327	+				+0.1
2,233,382	-				+0.0
2,233,502	+				+0.1
2,233,510	-				-0.3
2,233,663	+	sucCD	DVU2137	0.14	-0.1
2,233,739	-	sucCD	DVU2137	0.17	-0.2
2,233,935	+	sucCD	DVU2137	0.26	-0.6
2,233,936	-	sucCD	DVU2137	0.27	-1.9
2,233,954	+	sucCD	DVU2137	0.27	-0.0
2,234,087	-	sucCD	DVU2137	0.34	-0.1
2,234,087	-	sucCD	DVU2137	0.34	+0.3
2,234,113	+	sucCD	DVU2137	0.35	-0.2
2,234,121	-	sucCD	DVU2137	0.35	+1.3
2,234,199	+	sucCD	DVU2137	0.39	-1.4
2,234,214	+	sucCD	DVU2137	0.40	+0.5
2,234,263	-	sucCD	DVU2137	0.42	-0.2
2,234,675	-	sucCD	DVU2137	0.61	-0.3
2,234,708	+	sucCD	DVU2137	0.63	-0.2
2,235,017	-	sucCD	DVU2137	0.77	+0.2
2,235,073	-	sucCD	DVU2137	0.80	-0.3
2,235,143	+	sucCD	DVU2137	0.83	-1.0
2,235,167	-	sucCD	DVU2137	0.84	-0.8
2,235,236	-	sucCD	DVU2137	0.88	-0.6
2,235,538	+				-0.7
2,235,702	-		DVU2138	0.25	+0.0
2,235,724	-		DVU2138	0.29	+0.3
2,235,754	+		DVU2138	0.33	+0.4
2,235,941	+		DVU2138	0.62	-0.2
2,235,993	-		DVU2138	0.70	+0.5
2,236,043	+		DVU2138	0.77	-0.4
2,236,170	-				+0.4
2,236,170	-				-0.0
2,236,171	+				+0.2
2,236,206	+				+0.9
2,236,214	-				+0.0
2,236,422	-	aphA	DVU2139	0.14	-0.7
2,236,452	+	aphA	DVU2139	0.16	-0.3
2,236,474	-	aphA	DVU2139	0.17	-0.2