Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2043 and DVU2044 are separated by 108 nucleotides DVU2044 and DVU2045 overlap by 8 nucleotides DVU2045 and DVU2046 are separated by 139 nucleotides DVU2046 and DORF15206 overlap by 16 nucleotides
DVU2043: DVU2043 - conserved hypothetical protein (TIGR), at 2,120,862 to 2,122,463
DVU2043
DVU2044: DVU2044 - hypothetical protein (TIGR), at 2,122,572 to 2,122,697
DVU2044
DVU2045: DVU2045 - hypothetical protein (TIGR), at 2,122,690 to 2,122,872
DVU2045
DVU2046: DVU2046 - hypothetical protein (TIGR), at 2,123,012 to 2,123,182
DVU2046
DORF15206: DORF15206 - no description, at 2,123,167 to 2,125,602
DORF15206
Position (kb)
2123
2124 Strain fitness (log2 ratio)
-2
-1
0
1 at 2122.022 kb on + strand, within DVU2043 at 2122.110 kb on + strand, within DVU2043 at 2122.110 kb on - strand, within DVU2043 at 2122.119 kb on + strand, within DVU2043 at 2122.211 kb on - strand, within DVU2043 at 2122.223 kb on - strand, within DVU2043 at 2122.306 kb on + strand at 2122.424 kb on + strand at 2122.424 kb on + strand at 2122.483 kb on + strand at 2122.491 kb on - strand at 2122.526 kb on - strand at 2122.532 kb on - strand at 2122.537 kb on - strand at 2122.641 kb on - strand, within DVU2044 at 2122.659 kb on + strand, within DVU2044 at 2122.694 kb on - strand at 2122.711 kb on + strand, within DVU2045 at 2122.860 kb on - strand at 2122.864 kb on + strand at 2122.889 kb on + strand at 2122.900 kb on + strand at 2123.086 kb on - strand, within DVU2046 at 2123.164 kb on + strand, within DVU2046 at 2123.172 kb on - strand at 2123.336 kb on - strand at 2123.399 kb on - strand at 2123.408 kb on + strand at 2123.463 kb on - strand, within DORF15206 at 2123.463 kb on - strand, within DORF15206 at 2123.472 kb on + strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.605 kb on - strand, within DORF15206 at 2123.690 kb on + strand, within DORF15206 at 2123.890 kb on + strand, within DORF15206 at 2124.053 kb on - strand, within DORF15206 at 2124.068 kb on + strand, within DORF15206 at 2124.068 kb on + strand, within DORF15206 at 2124.073 kb on + strand, within DORF15206 at 2124.076 kb on - strand, within DORF15206 at 2124.156 kb on + strand, within DORF15206 at 2124.156 kb on - strand, within DORF15206
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfite (60/30-60 mM) remove 2,122,022 + DVU2043 0.72 -1.1 2,122,110 + DVU2043 0.78 -1.7 2,122,110 - DVU2043 0.78 +0.2 2,122,119 + DVU2043 0.78 +0.6 2,122,211 - DVU2043 0.84 -0.0 2,122,223 - DVU2043 0.85 -0.1 2,122,306 + +0.7 2,122,424 + -0.4 2,122,424 + -1.2 2,122,483 + -0.5 2,122,491 - -0.8 2,122,526 - -0.2 2,122,532 - +0.2 2,122,537 - -0.5 2,122,641 - DVU2044 0.55 +0.5 2,122,659 + DVU2044 0.69 -0.0 2,122,694 - +0.1 2,122,711 + DVU2045 0.11 +0.2 2,122,860 - -0.0 2,122,864 + -0.4 2,122,889 + -0.3 2,122,900 + +0.2 2,123,086 - DVU2046 0.43 -0.9 2,123,164 + DVU2046 0.89 -0.4 2,123,172 - -0.3 2,123,336 - +0.0 2,123,399 - -0.8 2,123,408 + +0.9 2,123,463 - DORF15206 0.12 +1.6 2,123,463 - DORF15206 0.12 +0.2 2,123,472 + DORF15206 0.13 -0.3 2,123,536 - DORF15206 0.15 -1.2 2,123,536 - DORF15206 0.15 +0.2 2,123,536 - DORF15206 0.15 +0.1 2,123,536 - DORF15206 0.15 -0.2 2,123,605 - DORF15206 0.18 -0.6 2,123,690 + DORF15206 0.21 -2.4 2,123,890 + DORF15206 0.30 -0.1 2,124,053 - DORF15206 0.36 +0.3 2,124,068 + DORF15206 0.37 -0.7 2,124,068 + DORF15206 0.37 -0.4 2,124,073 + DORF15206 0.37 -0.3 2,124,076 - DORF15206 0.37 +1.0 2,124,156 + DORF15206 0.41 +0.1 2,124,156 - DORF15206 0.41 +0.3
Or see this region's nucleotide sequence