Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1876

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
1,942,857	-	clpB	DVU1874	0.76	-0.3
1,942,857	-	clpB	DVU1874	0.76	-1.6
1,942,965	+	clpB	DVU1874	0.81	-0.8
1,943,039	-	clpB	DVU1874	0.83	-0.7
1,943,059	-	clpB	DVU1874	0.84	+1.1
1,943,102	-	clpB	DVU1874	0.86	+1.6
1,943,187	-	clpB	DVU1874	0.89	-0.4
1,943,431	-				-0.6
1,943,600	-		DVU1875	0.34	-0.1
1,943,643	-		DVU1875	0.47	+0.1
1,943,796	+				+0.1
1,943,809	+				-0.6
1,943,834	+				-0.6
1,943,879	+				+0.6
1,943,887	-				-0.9
1,943,888	+				+1.4
1,943,974	+	dnaJ	DVU1876	0.14	+1.1
1,943,974	+	dnaJ	DVU1876	0.14	-0.9
1,943,974	+	dnaJ	DVU1876	0.14	-0.7
1,943,974	+	dnaJ	DVU1876	0.14	-0.8
1,943,982	-	dnaJ	DVU1876	0.15	-0.6
1,943,982	-	dnaJ	DVU1876	0.15	-2.0
1,944,060	+	dnaJ	DVU1876	0.23	-0.4
1,944,060	+	dnaJ	DVU1876	0.23	-0.8
1,944,067	+	dnaJ	DVU1876	0.24	-1.1
1,944,122	+	dnaJ	DVU1876	0.29	+0.5
1,944,172	+	dnaJ	DVU1876	0.35	-1.1
1,944,421	-	dnaJ	DVU1876	0.61	-0.7
1,944,505	-	dnaJ	DVU1876	0.70	-0.7
1,944,612	+	dnaJ	DVU1876	0.81	-0.9
1,944,805	-				+0.5
1,944,874	+				+1.8
1,944,931	+				-1.3