Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1341

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
1,417,259	-		DVU1339	0.58	-1.1
1,417,315	-		DVU1339	0.65	+0.4
1,417,315	-		DVU1339	0.65	-0.6
1,417,386	+		DVU1339	0.74	-0.7
1,417,431	-		DVU1339	0.79	-0.1
1,417,452	+		DVU1339	0.82	+0.0
1,417,520	+		DVU1339	0.90	-0.3
1,417,520	+		DVU1339	0.90	-0.9
1,417,561	+				+0.1
1,417,749	+				-0.4
1,417,751	+				+0.1
1,417,772	-				-0.2
1,417,789	+				+0.1
1,417,834	+	ZUR	DVU1340	0.14	-0.6
1,417,926	+	ZUR	DVU1340	0.32	+0.4
1,417,969	-	ZUR	DVU1340	0.41	+0.5
1,417,975	+	ZUR	DVU1340	0.42	-2.4
1,417,991	-	ZUR	DVU1340	0.45	-0.5
1,417,993	-	ZUR	DVU1340	0.46	-1.0
1,418,006	-	ZUR	DVU1340	0.48	-0.7
1,418,041	+	ZUR	DVU1340	0.56	-0.8
1,418,138	-	ZUR	DVU1340	0.75	+0.8
1,418,142	+	ZUR	DVU1340	0.76	+0.1
1,418,150	-	ZUR	DVU1340	0.78	-1.0
1,418,160	-	ZUR	DVU1340	0.80	-1.1
1,418,200	-	ZUR	DVU1340	0.88	+0.3
1,418,208	-	ZUR	DVU1340	0.89	-0.1
1,418,219	+				-0.0
1,418,245	+				-0.9
1,418,279	+				+0.0
1,418,318	-				-0.7
1,418,366	-	znuC	DVU1341	0.13	-1.3
1,418,368	+	znuC	DVU1341	0.13	-0.8
1,418,437	-	znuC	DVU1341	0.22	+1.4
1,418,485	+	znuC	DVU1341	0.28	-1.0
1,418,617	+	znuC	DVU1341	0.44	-1.1
1,418,625	-	znuC	DVU1341	0.45	-0.6
1,418,640	+	znuC	DVU1341	0.46	+1.2
1,418,682	+	znuC	DVU1341	0.52	-0.9
1,418,690	-	znuC	DVU1341	0.52	-1.3
1,418,795	+	znuC	DVU1341	0.65	-1.0
1,418,803	-	znuC	DVU1341	0.66	-0.3
1,418,803	-	znuC	DVU1341	0.66	-0.9
1,418,808	-	znuC	DVU1341	0.67	-0.5
1,418,862	+	znuC	DVU1341	0.73	-1.1
1,418,874	+	znuC	DVU1341	0.75	-1.1
1,418,888	+	znuC	DVU1341	0.76	-0.5
1,418,957	-	znuC	DVU1341	0.85	-0.3
1,419,089	-				-0.1
1,419,227	+	znuB	DVU1342	0.18	-0.1
1,419,238	+	znuB	DVU1342	0.19	-1.0
1,419,265	+	znuB	DVU1342	0.23	-0.4
1,419,265	+	znuB	DVU1342	0.23	-0.6
1,419,325	+	znuB	DVU1342	0.30	-0.9
1,419,403	-	znuB	DVU1342	0.40	-0.7
1,419,410	+	znuB	DVU1342	0.41	+0.3
1,419,457	-	znuB	DVU1342	0.46	-0.0
1,419,457	-	znuB	DVU1342	0.46	-0.7
1,419,493	+	znuB	DVU1342	0.51	+0.1
1,419,496	-	znuB	DVU1342	0.51	-0.7
1,419,498	+	znuB	DVU1342	0.51	-0.4
1,419,498	+	znuB	DVU1342	0.51	-0.4
1,419,498	+	znuB	DVU1342	0.51	+1.5
1,419,572	+	znuB	DVU1342	0.61	-0.1
1,419,593	-	znuB	DVU1342	0.63	+0.0
1,419,595	-	znuB	DVU1342	0.63	-0.7
1,419,626	+	znuB	DVU1342	0.67	-0.9
1,419,626	+	znuB	DVU1342	0.67	-0.8
1,419,723	+	znuB	DVU1342	0.79	-1.1
1,419,733	+	znuB	DVU1342	0.81	-0.6
1,419,823	+				-0.4
1,419,839	-				+0.2
1,419,860	+				-1.5
1,419,861	+				-0.9
1,419,877	-				-0.6
1,420,003	+	znuA	DVU1343	0.11	-0.6
1,420,003	+	znuA	DVU1343	0.11	-0.8
1,420,011	-	znuA	DVU1343	0.12	-1.1
1,420,011	-	znuA	DVU1343	0.12	-1.0
1,420,011	-	znuA	DVU1343	0.12	-0.5
1,420,035	+	znuA	DVU1343	0.14	-0.3
1,420,046	+	znuA	DVU1343	0.15	-0.8