Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0823
Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (60/30-60 mM) |
---|---|---|---|---|---|
remove | |||||
910,619 | + | DVU0822 | 0.15 | -0.6 | |
910,878 | + | DVU0822 | 0.54 | -0.1 | |
910,971 | - | DVU0822 | 0.68 | -1.2 | |
911,587 | - | +0.5 | |||
911,661 | - | -0.1 | |||
911,719 | - | argJ | DVU0823 | 0.11 | -0.7 |
911,729 | + | argJ | DVU0823 | 0.12 | -0.7 |
911,749 | - | argJ | DVU0823 | 0.14 | -1.3 |
911,761 | + | argJ | DVU0823 | 0.15 | -0.3 |
911,761 | + | argJ | DVU0823 | 0.15 | -0.1 |
911,761 | + | argJ | DVU0823 | 0.15 | -0.5 |
911,960 | - | argJ | DVU0823 | 0.32 | -2.3 |
912,086 | + | argJ | DVU0823 | 0.42 | -1.4 |
912,094 | - | argJ | DVU0823 | 0.43 | -1.2 |
912,233 | + | argJ | DVU0823 | 0.55 | -0.8 |
912,252 | + | argJ | DVU0823 | 0.56 | -1.1 |
912,361 | - | argJ | DVU0823 | 0.66 | -1.7 |
912,399 | + | argJ | DVU0823 | 0.69 | -0.8 |
912,505 | - | argJ | DVU0823 | 0.78 | -1.1 |
912,548 | + | argJ | DVU0823 | 0.81 | -1.5 |
912,627 | + | argJ | DVU0823 | 0.88 | -0.4 |
912,635 | - | argJ | DVU0823 | 0.89 | -1.9 |
912,728 | + | -0.4 | |||
912,755 | - | -1.5 | |||
912,840 | - | +0.7 | |||
912,840 | - | -1.0 | |||
912,855 | + | +0.4 | |||
912,939 | + | -0.1 | |||
912,949 | - | -0.1 | |||
913,036 | - | -0.9 | |||
913,109 | + | -0.3 | |||
913,117 | - | -1.1 | |||
913,117 | - | +0.6 | |||
913,117 | - | +0.5 | |||
913,142 | - | -1.0 | |||
913,142 | - | +0.1 | |||
913,202 | + | +0.2 | |||
913,233 | + | +0.2 | |||
913,254 | - | -1.5 |
Or see this region's nucleotide sequence