Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3649

Experiment: library passed through aphids in food, 72 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	library passed through aphids in food, 72 hours
4,333,914	+		Psyr_3648	0.27	-0.2
4,333,914	+		Psyr_3648	0.27	-3.2
4,333,914	+		Psyr_3648	0.27	+0.8
4,333,914	+		Psyr_3648	0.27	-1.7
4,333,915	-		Psyr_3648	0.27	+0.5
4,333,993	+		Psyr_3648	0.34	-0.4
4,334,109	+		Psyr_3648	0.45	+0.7
4,334,110	-		Psyr_3648	0.45	-1.8
4,334,110	-		Psyr_3648	0.45	-0.8
4,334,110	-		Psyr_3648	0.45	+0.6
4,334,502	+		Psyr_3648	0.80	+1.7
4,334,503	-		Psyr_3648	0.81	-1.6
4,334,581	+		Psyr_3648	0.88	-0.6
4,334,581	+		Psyr_3648	0.88	-2.2
4,334,581	+		Psyr_3648	0.88	-0.1
4,334,581	+		Psyr_3648	0.88	-1.5
4,334,582	-		Psyr_3648	0.88	+2.0
4,334,582	-		Psyr_3648	0.88	-0.0
4,334,631	+				+0.7
4,334,631	+				+1.6
4,334,632	-				-0.9
4,334,747	+				-0.2
4,334,747	+				+1.4
4,334,776	-				+0.1
4,334,777	+				-1.1
4,334,777	+				+3.4
4,334,777	+				-2.5
4,334,778	-				-0.8
4,334,778	-				-1.6
4,334,778	-				-2.3
4,334,778	-				-0.8
4,334,778	-				-1.8
4,334,778	-				-1.0
4,334,793	+				+0.1
4,334,793	+				+1.6
4,334,793	+				+1.1
4,334,793	+				-0.7
4,334,794	-				-1.3
4,334,796	+				-2.2
4,334,797	-				-3.3
4,334,929	+				-1.3
4,334,936	+				-1.3
4,334,936	+				-1.6
4,334,936	+				-0.7
4,334,936	+				+0.5
4,334,936	+				-0.2
4,334,937	-				-1.1
4,334,937	-				-1.2
4,334,937	-				+0.4
4,334,937	-				-2.2
4,334,938	+				+0.4
4,334,939	-				-1.9
4,335,212	+		Psyr_3649	0.30	+1.2
4,335,212	+		Psyr_3649	0.30	+0.4
4,335,212	+		Psyr_3649	0.30	-2.1
4,335,212	+		Psyr_3649	0.30	-0.5
4,335,212	+		Psyr_3649	0.30	-0.3
4,335,212	+		Psyr_3649	0.30	-2.1
4,335,212	+		Psyr_3649	0.30	-2.0
4,335,212	+		Psyr_3649	0.30	-1.5
4,335,212	+		Psyr_3649	0.30	-1.2
4,335,212	+		Psyr_3649	0.30	-2.1
4,335,212	+		Psyr_3649	0.30	-2.2
4,335,212	+		Psyr_3649	0.30	-0.3
4,335,212	+		Psyr_3649	0.30	-0.7
4,335,212	+		Psyr_3649	0.30	+0.0
4,335,212	+		Psyr_3649	0.30	+0.9
4,335,212	+		Psyr_3649	0.30	-2.7
4,335,212	+		Psyr_3649	0.30	+0.4
4,335,212	+		Psyr_3649	0.30	-0.3
4,335,213	-		Psyr_3649	0.30	-1.4
4,335,213	-		Psyr_3649	0.30	-1.2
4,335,213	-		Psyr_3649	0.30	+0.2
4,335,213	-		Psyr_3649	0.30	+0.0
4,335,213	-		Psyr_3649	0.30	-1.3
4,335,213	-		Psyr_3649	0.30	-2.1
4,335,213	-		Psyr_3649	0.30	-1.7
4,335,404	+		Psyr_3649	0.44	-1.2
4,335,404	+		Psyr_3649	0.44	-1.5
4,335,405	-		Psyr_3649	0.44	-0.2
4,335,997	+		Psyr_3649	0.89	+1.6
4,335,997	+		Psyr_3649	0.89	-0.6
4,335,997	+		Psyr_3649	0.89	+0.4
4,335,997	+		Psyr_3649	0.89	-2.2
4,335,997	+		Psyr_3649	0.89	+0.3
4,335,997	+		Psyr_3649	0.89	+0.4
4,335,997	+		Psyr_3649	0.89	-1.2
4,335,997	+		Psyr_3649	0.89	+1.2
4,335,997	+		Psyr_3649	0.89	+0.0
4,335,997	+		Psyr_3649	0.89	-0.0
4,335,997	+		Psyr_3649	0.89	+0.2
4,335,997	+		Psyr_3649	0.89	-0.5
4,335,997	+		Psyr_3649	0.89	+1.5
4,335,997	+		Psyr_3649	0.89	-1.9
4,335,997	+		Psyr_3649	0.89	+1.0
4,335,997	+		Psyr_3649	0.89	-0.9
4,335,997	+		Psyr_3649	0.89	+0.1
4,335,997	+		Psyr_3649	0.89	-1.3
4,335,997	+		Psyr_3649	0.89	+1.2
4,335,997	+		Psyr_3649	0.89	-0.8
4,335,997	+		Psyr_3649	0.89	-0.5
4,335,997	+		Psyr_3649	0.89	-2.0
4,335,998	-		Psyr_3649	0.89	-0.6
4,335,998	-		Psyr_3649	0.89	+1.0
4,335,998	-		Psyr_3649	0.89	+2.4
4,335,998	-		Psyr_3649	0.89	-1.2
4,335,998	-		Psyr_3649	0.89	+0.8
4,335,998	-		Psyr_3649	0.89	-0.9
4,335,998	-		Psyr_3649	0.89	-0.6
4,335,998	-		Psyr_3649	0.89	-0.8
4,335,998	-		Psyr_3649	0.89	-0.2
4,335,998	-		Psyr_3649	0.89	-2.2
4,335,998	-		Psyr_3649	0.89	-2.7
4,335,998	-		Psyr_3649	0.89	-2.7
4,335,999	+		Psyr_3649	0.89	-1.3
4,335,999	+		Psyr_3649	0.89	-0.6
4,335,999	+		Psyr_3649	0.89	+2.7
4,335,999	+		Psyr_3649	0.89	-0.8
4,335,999	+		Psyr_3649	0.89	-0.6
4,335,999	+		Psyr_3649	0.89	+1.0
4,335,999	+		Psyr_3649	0.89	-1.8
4,335,999	+		Psyr_3649	0.89	+0.2
4,335,999	+		Psyr_3649	0.89	-0.7
4,335,999	+		Psyr_3649	0.89	+0.2
4,335,999	+		Psyr_3649	0.89	-0.6
4,335,999	+		Psyr_3649	0.89	-2.0
4,335,999	+		Psyr_3649	0.89	-1.1
4,335,999	+		Psyr_3649	0.89	+0.6
4,335,999	+		Psyr_3649	0.89	-0.4
4,335,999	+		Psyr_3649	0.89	+0.4
4,335,999	+		Psyr_3649	0.89	+1.0
4,335,999	+		Psyr_3649	0.89	-1.6
4,335,999	+		Psyr_3649	0.89	+0.8
4,335,999	+		Psyr_3649	0.89	+2.8
4,335,999	+		Psyr_3649	0.89	-1.1
4,335,999	+		Psyr_3649	0.89	-0.6
4,335,999	+		Psyr_3649	0.89	-1.2
4,335,999	+		Psyr_3649	0.89	-1.3
4,335,999	+		Psyr_3649	0.89	+1.7
4,335,999	+		Psyr_3649	0.89	+0.4
4,335,999	+		Psyr_3649	0.89	-0.1
4,335,999	+		Psyr_3649	0.89	-0.1
4,335,999	+		Psyr_3649	0.89	+1.0
4,335,999	+		Psyr_3649	0.89	-0.6
4,336,000	-		Psyr_3649	0.89	+2.2
4,336,000	-		Psyr_3649	0.89	-2.5
4,336,000	-		Psyr_3649	0.89	+0.4
4,336,000	-		Psyr_3649	0.89	-2.5
4,336,000	-		Psyr_3649	0.89	-2.0
4,336,000	-		Psyr_3649	0.89	-1.8
4,336,000	-		Psyr_3649	0.89	-1.8
4,336,000	-		Psyr_3649	0.89	-2.4
4,336,000	-		Psyr_3649	0.89	-1.3
4,336,000	-		Psyr_3649	0.89	-2.2
4,336,000	-		Psyr_3649	0.89	-0.3
4,336,000	-		Psyr_3649	0.89	-0.8
4,336,000	-		Psyr_3649	0.89	-1.0
4,336,000	-		Psyr_3649	0.89	+0.5
4,336,000	-		Psyr_3649	0.89	+0.1
4,336,001	+		Psyr_3649	0.89	+0.8
4,336,001	+		Psyr_3649	0.89	-0.8
4,336,001	+		Psyr_3649	0.89	+0.4
4,336,001	+		Psyr_3649	0.89	-1.5
4,336,001	+		Psyr_3649	0.89	-2.6
4,336,001	+		Psyr_3649	0.89	-0.2
4,336,001	+		Psyr_3649	0.89	-0.8
4,336,001	+		Psyr_3649	0.89	+0.0
4,336,002	-		Psyr_3649	0.89	-1.4
4,336,002	-		Psyr_3649	0.89	-0.6
4,336,002	-		Psyr_3649	0.89	-1.9
4,336,002	-		Psyr_3649	0.89	-0.0
4,336,002	-		Psyr_3649	0.89	-0.7
4,336,002	-		Psyr_3649	0.89	-2.1
4,336,002	-		Psyr_3649	0.89	-2.5
4,336,002	-		Psyr_3649	0.89	-1.9
4,336,126	+				-0.9
4,336,126	+				+0.1
4,336,126	+				+0.1
4,336,181	+				+1.0
4,336,181	+				+0.1
4,336,181	+				+0.9
4,336,181	+				+1.6
4,336,181	+				-0.3
4,336,182	-				-1.9
4,336,182	-				-1.2
4,336,185	+				+0.6
4,336,185	+				-1.0
4,336,185	+				+2.8
4,336,185	+				+0.6
4,336,185	+				-1.7
4,336,185	+				+2.0
4,336,185	+				+5.9
4,336,185	+				+0.4
4,336,185	+				-2.2
4,336,185	+				-0.5
4,336,185	+				+0.4
4,336,185	+				+0.2
4,336,185	+				+0.6
4,336,185	+				-0.2
4,336,186	-				-1.3
4,336,186	-				-2.0
4,336,186	-				+1.0
4,336,186	-				+0.4
4,336,186	-				-1.5
4,336,186	-				-1.2
4,336,186	-				-2.1
4,336,186	-				-3.1
4,336,186	-				-1.3
4,336,186	-				-2.8
4,336,186	-				-1.1
4,336,186	-				-1.2
4,336,186	-				-1.5
4,336,186	-				+0.0
4,336,186	-				-0.6
4,336,187	+				-0.7
4,336,187	+				-0.4
4,336,187	+				+0.4
4,336,188	-				-0.8