Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0226 and DVU0227 are separated by 2 nucleotides DVU0227 and DORF3938 are separated by 84 nucleotides
DVU0226: DVU0226 - hypothetical protein (TIGR), at 262,657 to 263,796
DVU0226
DVU0227: DVU0227 - conserved hypothetical protein (TIGR), at 263,799 to 264,329
DVU0227
DORF3938: DORF3938 - no description, at 264,414 to 264,713
DORF3938
Position (kb) 263
264
265 Strain fitness (log2 ratio) -2
-1
0
1
2 at 262.803 kb on + strand, within DVU0226 at 262.810 kb on - strand, within DVU0226 at 262.816 kb on - strand, within DVU0226 at 262.875 kb on + strand, within DVU0226 at 262.921 kb on + strand, within DVU0226 at 262.924 kb on - strand, within DVU0226 at 262.934 kb on + strand, within DVU0226 at 263.204 kb on + strand, within DVU0226 at 263.223 kb on + strand, within DVU0226 at 263.231 kb on - strand, within DVU0226 at 263.269 kb on + strand, within DVU0226 at 263.289 kb on - strand, within DVU0226 at 263.294 kb on + strand, within DVU0226 at 263.337 kb on + strand, within DVU0226 at 263.339 kb on + strand, within DVU0226 at 263.339 kb on + strand, within DVU0226 at 263.345 kb on - strand, within DVU0226 at 263.393 kb on - strand, within DVU0226 at 263.400 kb on - strand, within DVU0226 at 263.436 kb on + strand, within DVU0226 at 263.488 kb on - strand, within DVU0226 at 263.541 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.632 kb on - strand, within DVU0226 at 263.650 kb on + strand, within DVU0226 at 263.879 kb on + strand, within DVU0227 at 263.989 kb on - strand, within DVU0227 at 264.128 kb on - strand, within DVU0227 at 264.227 kb on - strand, within DVU0227 at 264.247 kb on - strand, within DVU0227 at 264.372 kb on - strand at 264.401 kb on + strand at 264.401 kb on + strand at 265.184 kb on - strand at 265.237 kb on - strand at 265.296 kb on + strand at 265.314 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfite (60/30-60 mM) remove 262,803 + DVU0226 0.13 -0.8 262,810 - DVU0226 0.13 +0.1 262,816 - DVU0226 0.14 -1.1 262,875 + DVU0226 0.19 +1.6 262,921 + DVU0226 0.23 -0.3 262,924 - DVU0226 0.23 -0.7 262,934 + DVU0226 0.24 -0.0 263,204 + DVU0226 0.48 -0.2 263,223 + DVU0226 0.50 +1.0 263,231 - DVU0226 0.50 -0.6 263,269 + DVU0226 0.54 +1.2 263,289 - DVU0226 0.55 -0.6 263,294 + DVU0226 0.56 +0.3 263,337 + DVU0226 0.60 +0.7 263,339 + DVU0226 0.60 -0.5 263,339 + DVU0226 0.60 +0.1 263,345 - DVU0226 0.60 -0.2 263,393 - DVU0226 0.65 +0.2 263,400 - DVU0226 0.65 -0.1 263,436 + DVU0226 0.68 +0.1 263,488 - DVU0226 0.73 -0.3 263,541 - DVU0226 0.78 -0.3 263,577 - DVU0226 0.81 -0.5 263,577 - DVU0226 0.81 -0.5 263,577 - DVU0226 0.81 -0.4 263,577 - DVU0226 0.81 +0.2 263,577 - DVU0226 0.81 -0.1 263,632 - DVU0226 0.86 -0.8 263,650 + DVU0226 0.87 -2.5 263,879 + DVU0227 0.15 +1.7 263,989 - DVU0227 0.36 -0.9 264,128 - DVU0227 0.62 +0.2 264,227 - DVU0227 0.81 -0.4 264,247 - DVU0227 0.84 +1.0 264,372 - -0.8 264,401 + +0.3 264,401 + -0.4 265,184 - +1.9 265,237 - -0.7 265,296 + -0.3 265,314 + -0.5
Or see this region's nucleotide sequence