Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0028

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
32,252	+		DVU0027	0.68	-0.0
32,305	+		DVU0027	0.72	-0.2
32,360	-		DVU0027	0.76	+0.0
32,381	+		DVU0027	0.77	-0.2
32,381	+		DVU0027	0.77	-0.3
32,428	-		DVU0027	0.81	+0.1
32,471	-		DVU0027	0.84	-0.4
32,473	-		DVU0027	0.84	-0.2
32,478	-		DVU0027	0.84	+0.1
32,523	-		DVU0027	0.87	-0.5
32,553	+		DVU0027	0.89	-0.3
32,558	+		DVU0027	0.90	-0.1
32,569	-				+0.1
32,569	-				+0.3
32,576	-				-0.6
32,597	+				-0.0
32,668	-				+0.1
32,671	+				-0.4
32,681	+				-0.1
32,686	+				-0.1
32,689	-				-0.4
32,694	-				-0.4
32,711	+				-0.1
32,790	-				-0.7
32,839	-				+0.1
32,962	+				+0.2
32,965	-				-0.6
32,967	+				-0.4
32,970	-				+0.6
32,970	-				-0.5
32,978	+				-0.2
32,983	+				+0.1
33,012	+				+0.5
33,017	+				+0.0
33,108	+				-0.3
33,110	+				+2.0
33,208	+				-0.1
33,212	-				+0.1
33,276	+	csaA	DVU0028	0.12	-0.1
33,276	+	csaA	DVU0028	0.12	+0.0
33,281	-	csaA	DVU0028	0.13	-0.3
33,282	+	csaA	DVU0028	0.13	-0.5
33,309	-	csaA	DVU0028	0.20	+0.6
33,440	+	csaA	DVU0028	0.55	-1.5
33,440	+	csaA	DVU0028	0.55	+2.8
33,440	+	csaA	DVU0028	0.55	+0.5
33,465	+	csaA	DVU0028	0.62	+0.0
33,473	-	csaA	DVU0028	0.64	-1.0
33,488	+	csaA	DVU0028	0.68	-0.2
33,505	-	csaA	DVU0028	0.72	+0.6
33,520	-	csaA	DVU0028	0.76	+2.2
33,538	+	csaA	DVU0028	0.81	+0.4
33,541	-	csaA	DVU0028	0.82	-0.5
33,545	-	csaA	DVU0028	0.83	-0.5
33,583	+				-0.2
33,598	+				+0.2
33,618	+				-0.3
33,636	-				+0.4
33,663	+				-0.4
33,697	-				-0.3
33,740	+				-0.2
33,740	+				-0.9
33,747	+				+0.1
33,755	+				+0.3
33,755	+				-0.1
33,760	+				+0.2
33,763	-				+1.7
33,767	+				-0.6
33,767	+				-0.6
33,767	+				+0.2
33,772	+				-0.4
33,772	+				+0.2
33,772	+				-0.1
33,774	+				+0.6
33,788	-				-0.7
33,827	-				-0.4
33,827	-				+0.5
33,827	-				+0.2
33,827	-				+0.0
33,833	+				-0.1
33,841	-				+0.0
33,876	+				-0.3
33,884	-				-0.5
33,889	-				-0.7
33,889	-				-0.8
33,916	+				-1.8
33,921	+				-1.7
33,921	+				+0.6
33,924	-				-0.2
33,929	-				-0.3
33,977	+				-0.0
33,977	+				-0.4
33,985	-				-1.1
33,985	-				+0.2
34,013	+				-1.3
34,114	+				-1.2
34,122	-				-1.7
34,226	+		DVU0029	0.14	-1.3
34,226	+		DVU0029	0.14	-0.4
34,248	+		DVU0029	0.15	-0.5
34,527	+		DVU0029	0.32	-0.4
34,555	-		DVU0029	0.33	-1.6
34,575	+		DVU0029	0.34	-0.6