Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3344

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
3,516,549	+				-0.2
3,516,549	+				-0.2
3,516,549	+				+0.7
3,516,549	+				+0.0
3,516,557	-				-0.5
3,516,557	-				+0.0
3,516,601	-				-0.1
3,516,669	+		DVU3342	0.23	-0.9
3,516,702	+		DVU3342	0.31	+0.0
3,516,720	+		DVU3342	0.35	+0.8
3,516,736	+		DVU3342	0.39	-0.6
3,516,745	+		DVU3342	0.41	+0.1
3,516,826	+		DVU3342	0.61	-0.0
3,516,848	-		DVU3342	0.66	-0.2
3,516,930	+		DVU3342	0.86	+0.7
3,516,936	+		DVU3342	0.87	-0.1
3,516,936	+		DVU3342	0.87	+0.2
3,516,938	+		DVU3342	0.88	+0.2
3,516,938	+		DVU3342	0.88	-1.3
3,516,938	-		DVU3342	0.88	-0.1
3,516,938	-		DVU3342	0.88	-1.0
3,516,944	-		DVU3342	0.89	-1.1
3,517,027	+		DVU3343	0.10	+0.3
3,517,185	-		DVU3343	0.48	-0.9
3,517,190	-		DVU3343	0.49	+0.3
3,517,190	-		DVU3343	0.49	-0.1
3,517,209	-		DVU3343	0.53	-0.7
3,517,226	-		DVU3343	0.57	+0.5
3,517,229	+		DVU3343	0.58	+1.6
3,517,239	-		DVU3343	0.60	-0.4
3,517,333	+		DVU3343	0.83	+0.5
3,517,407	-				+1.0
3,517,407	-				-0.5
3,517,424	+				+0.2
3,517,484	-				+0.5
3,517,491	-				-0.1
3,517,527	-				+0.1
3,517,529	+				-0.3
3,517,529	+				+0.3
3,517,529	+				-0.6
3,517,529	+				+0.8
3,517,538	-		DVU3344	0.10	-1.6
3,517,542	-		DVU3344	0.11	-0.6
3,517,585	+		DVU3344	0.14	-0.5
3,517,592	-		DVU3344	0.15	+0.3
3,517,594	-		DVU3344	0.15	+0.3
3,517,598	+		DVU3344	0.16	-0.8
3,517,606	-		DVU3344	0.16	-0.0
3,517,670	+		DVU3344	0.22	+0.5
3,517,670	+		DVU3344	0.22	-0.1
3,517,670	+		DVU3344	0.22	+0.3
3,517,690	-		DVU3344	0.23	+1.5
3,517,754	+		DVU3344	0.29	+1.1
3,517,764	-		DVU3344	0.30	-0.4
3,517,765	+		DVU3344	0.30	+0.6
3,517,788	-		DVU3344	0.32	-0.2
3,517,788	-		DVU3344	0.32	+0.2
3,517,803	+		DVU3344	0.33	+0.6
3,517,806	-		DVU3344	0.33	-0.1
3,517,813	+		DVU3344	0.34	+0.4
3,517,832	+		DVU3344	0.36	-0.1
3,517,832	+		DVU3344	0.36	+0.2
3,517,859	-		DVU3344	0.38	-2.0
3,517,859	-		DVU3344	0.38	-0.1
3,517,862	+		DVU3344	0.38	+0.0
3,517,977	+		DVU3344	0.48	+0.4
3,517,987	+		DVU3344	0.49	-0.3
3,517,992	+		DVU3344	0.49	+0.7
3,518,025	+		DVU3344	0.52	-0.2
3,518,092	+		DVU3344	0.58	+0.3
3,518,136	-		DVU3344	0.62	+0.1
3,518,171	-		DVU3344	0.65	-1.0
3,518,211	+		DVU3344	0.68	+0.3
3,518,224	+		DVU3344	0.69	+0.2
3,518,278	-		DVU3344	0.74	+0.0
3,518,278	-		DVU3344	0.74	-0.1
3,518,332	-		DVU3344	0.78	-0.1
3,518,382	+		DVU3344	0.83	+0.0
3,518,435	+		DVU3344	0.87	+1.2
3,518,506	+				+0.8
3,518,550	+				-0.8
3,518,573	+				+0.9
3,518,581	-				-0.6
3,518,605	-				-0.1
3,518,639	-				-0.5
3,518,669	+				-0.6
3,518,720	-		DORF24435	0.20	+0.1
3,518,853	+		DORF24435	0.65	+0.5
3,518,853	+		DORF24435	0.65	-0.1
3,518,982	-				-1.3
3,519,057	-				-0.3
3,519,107	+				-0.3
3,519,129	+				-0.4
3,519,191	-				-0.6
3,519,225	-				-0.6
3,519,249	+				-0.3
3,519,249	+				-0.6
3,519,257	-				+0.7
3,519,257	-				+0.3
3,519,561	+		DVU3347	0.54	+0.1