Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3184

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
3,343,385	-	dcrA	DVU3182	0.90	+0.6
3,343,395	-				-0.4
3,343,406	-				-0.1
3,343,422	+				-0.2
3,343,553	-				-0.0
3,343,553	-				-0.4
3,343,553	-				-1.3
3,343,605	-				+0.9
3,343,633	-				+0.0
3,343,672	-				-0.7
3,343,735	-				+0.3
3,343,736	-				+0.7
3,343,795	+				-0.1
3,343,808	-				-0.2
3,343,859	+				-0.7
3,343,867	-				-0.6
3,343,936	-				-0.6
3,343,936	-				+0.1
3,343,989	-	rbO	DVU3183	0.16	+0.8
3,344,302	+				-0.6
3,344,304	-				-0.3
3,344,310	-				+1.3
3,344,335	+				+0.1
3,344,335	+				-0.1
3,344,377	-		DVU3184	0.33	+0.0
3,344,377	-		DVU3184	0.33	+0.2
3,344,434	+		DVU3184	0.69	+0.2
3,344,434	+		DVU3184	0.69	+0.1
3,344,522	-				-0.5
3,344,569	+				-0.1
3,344,569	+				-0.1
3,344,577	-				-0.3
3,344,706	+				-0.1
3,344,747	-	roO	DVU3185	0.11	+0.5
3,344,747	-	roO	DVU3185	0.11	+0.4
3,344,796	-	roO	DVU3185	0.15	-0.2
3,344,803	-	roO	DVU3185	0.16	-0.3
3,344,818	-	roO	DVU3185	0.17	-0.1
3,344,820	+	roO	DVU3185	0.17	-1.8
3,344,825	+	roO	DVU3185	0.17	-0.4
3,344,828	-	roO	DVU3185	0.18	-0.4
3,344,850	+	roO	DVU3185	0.20	-0.2
3,344,867	+	roO	DVU3185	0.21	+1.0
3,344,885	-	roO	DVU3185	0.22	+0.1
3,344,929	+	roO	DVU3185	0.26	-1.6
3,344,950	+	roO	DVU3185	0.28	-1.8
3,344,982	+	roO	DVU3185	0.30	+0.4
3,344,982	+	roO	DVU3185	0.30	-0.5
3,345,010	+	roO	DVU3185	0.33	+1.0
3,345,133	+	roO	DVU3185	0.43	-1.6
3,345,141	-	roO	DVU3185	0.44	+0.1
3,345,152	+	roO	DVU3185	0.44	-0.3
3,345,161	+	roO	DVU3185	0.45	+0.7
3,345,169	-	roO	DVU3185	0.46	-0.7
3,345,171	+	roO	DVU3185	0.46	+0.1
3,345,179	-	roO	DVU3185	0.47	+0.2
3,345,315	-	roO	DVU3185	0.58	+0.7
3,345,439	+	roO	DVU3185	0.68	-0.1
3,345,447	-	roO	DVU3185	0.69	-0.6
3,345,477	+	roO	DVU3185	0.71	-0.3