Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3111

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
3,259,674	+		DVU3110	0.58	-0.8
3,259,703	+		DVU3110	0.59	-0.2
3,259,729	-		DVU3110	0.61	+1.5
3,259,756	-		DVU3110	0.62	-0.0
3,259,780	-		DVU3110	0.64	-1.1
3,259,790	-		DVU3110	0.64	-0.2
3,259,790	-		DVU3110	0.64	-0.0
3,259,858	-		DVU3110	0.68	-0.4
3,259,884	-		DVU3110	0.70	-1.8
3,259,985	-		DVU3110	0.76	+0.3
3,260,039	+		DVU3110	0.79	+0.1
3,260,083	+		DVU3110	0.81	-0.8
3,260,183	+		DVU3110	0.87	-0.3
3,260,184	-		DVU3110	0.87	-0.4
3,260,209	+		DVU3110	0.89	-0.5
3,260,227	-		DVU3110	0.90	+0.0
3,260,251	-				-0.3
3,260,268	+				-1.2
3,260,308	+				-0.4
3,260,316	-				+0.2
3,260,378	+				-1.8
3,260,386	-				-1.1
3,260,457	+				-0.3
3,260,465	-				-0.2
3,260,472	+				-0.3
3,260,614	-				-0.1
3,260,614	-				+1.3
3,260,620	+				-0.7
3,260,628	-				+0.7
3,260,695	+				-1.1
3,260,722	+				-0.8
3,260,732	+		DVU3111	0.10	+0.2
3,260,805	-		DVU3111	0.19	-0.3
3,260,950	-		DVU3111	0.37	-0.1
3,261,022	-		DVU3111	0.46	+0.3
3,261,075	-		DVU3111	0.53	+0.8
3,261,207	-		DVU3111	0.69	+0.6
3,261,212	-		DVU3111	0.70	+0.3
3,261,279	-		DVU3111	0.78	+0.2
3,261,313	-		DVU3111	0.82	-0.1
3,261,377	+				-0.3
3,261,390	-				-0.4
3,261,397	+				+1.2
3,261,404	-				-0.5
3,261,430	-				+0.6
3,261,433	+				+0.1
3,261,435	-				-0.2
3,261,489	+				-0.3
3,261,497	-				-0.1
3,261,668	+		DVU3112	0.20	+0.9
3,261,668	+		DVU3112	0.20	-0.8
3,261,688	-		DVU3112	0.23	+0.5
3,261,737	-		DVU3112	0.29	+0.2
3,261,774	+		DVU3112	0.33	-0.4
3,261,774	+		DVU3112	0.33	+0.2
3,261,774	+		DVU3112	0.33	-0.8
3,261,774	+		DVU3112	0.33	+0.0
3,261,786	+		DVU3112	0.35	+0.1
3,261,863	-		DVU3112	0.45	-0.3
3,262,045	-		DVU3112	0.67	-0.4
3,262,088	+		DVU3112	0.73	+0.3