Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2888

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
2,985,481	-		DVU2887	0.17	+0.2
2,985,488	+		DVU2887	0.18	+0.1
2,985,488	+		DVU2887	0.18	-0.5
2,985,488	+		DVU2887	0.18	+0.4
2,985,503	-		DVU2887	0.19	-0.7
2,985,541	+		DVU2887	0.23	-0.9
2,985,631	+		DVU2887	0.32	+1.8
2,985,718	+		DVU2887	0.41	+0.1
2,985,726	-		DVU2887	0.42	+0.1
2,985,726	-		DVU2887	0.42	-0.9
2,985,779	-		DVU2887	0.48	-0.0
2,985,807	+		DVU2887	0.51	-0.4
2,985,868	+		DVU2887	0.57	-0.0
2,985,889	-		DVU2887	0.59	-0.0
2,985,889	-		DVU2887	0.59	+0.1
2,985,910	+		DVU2887	0.61	+0.1
2,985,982	+		DVU2887	0.69	-0.2
2,986,049	-		DVU2887	0.76	-0.1
2,986,148	+		DVU2887	0.86	-0.4
2,986,162	+		DVU2887	0.87	+0.1
2,986,196	+				+0.0
2,986,223	+				-0.0
2,986,223	+				+0.3
2,986,363	+				-0.9
2,986,363	+				-0.4
2,986,363	+				+0.5
2,986,371	-				+0.1
2,986,371	-				-0.6
2,986,371	-				+0.6
2,986,371	-				-0.3
2,986,389	+				+0.5
2,986,389	+				-1.0
2,986,392	-				+0.3
2,986,434	+				+0.1
2,986,437	-				+0.3
2,986,442	-				-0.2
2,986,489	-				-0.6
2,986,539	+				-1.0
2,986,571	-		DVU2888	0.13	+0.4
2,986,571	-		DVU2888	0.13	-0.5
2,986,622	+		DVU2888	0.19	+1.1
2,986,628	-		DVU2888	0.19	-0.0
2,986,630	-		DVU2888	0.20	+0.3
2,986,639	+		DVU2888	0.21	-0.2
2,986,709	+		DVU2888	0.29	-0.2
2,986,709	+		DVU2888	0.29	-0.7
2,986,717	-		DVU2888	0.30	-2.2
2,986,717	-		DVU2888	0.30	+0.8
2,986,766	-		DVU2888	0.36	-0.1
2,986,795	+		DVU2888	0.40	+0.3
2,986,906	-		DVU2888	0.53	-0.1
2,986,993	+		DVU2888	0.64	+1.3
2,987,049	+		DVU2888	0.70	+1.3
2,987,183	-		DVU2888	0.86	+0.3
2,987,230	+				-0.3
2,987,230	+				-0.2
2,987,262	+				-1.3
2,987,289	+				+0.4
2,987,297	-				+0.2
2,987,471	+		DVU2889	0.33	-0.1
2,987,509	-		DVU2889	0.40	-0.2
2,987,574	-		DVU2889	0.52	+0.3
2,987,649	+		DVU2889	0.65	+0.5
2,987,717	+		DVU2889	0.78	-0.9
2,987,899	-				-0.0
2,987,984	-				-0.3
2,988,085	-				+0.7
2,988,086	+				+0.3
2,988,086	+				-1.0
2,988,087	+				-0.4
2,988,224	-		DVU2890	0.25	-0.2
2,988,293	+		DVU2890	0.35	-0.1