Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2717 and DVU2719 are separated by 135 nucleotides DVU2719 and DVU2720 are separated by 197 nucleotides DVU2720 and DORF43366 are separated by 20 nucleotides DORF43366 and DVU2721 are separated by 3 nucleotides
DVU2717: DVU2717 - hypothetical protein (TIGR), at 2,822,022 to 2,822,849
DVU2717
DVU2719: DVU2719 - conserved hypothetical protein (TIGR), at 2,822,985 to 2,823,359
DVU2719
DVU2720: DVU2720 - hypothetical protein (TIGR), at 2,823,557 to 2,823,886
DVU2720
DORF43366: DORF43366 - no description, at 2,823,907 to 2,824,041
DORF43366
DVU2721: DVU2721 - phage tail tape measure protein, TP901 family, putative (TIGR), at 2,824,045 to 2,825,985
DVU2721
Position (kb)
2822
2823
2824 Strain fitness (log2 ratio)
-1
0
1
2 at 2822.119 kb on - strand, within DVU2717 at 2822.126 kb on - strand, within DVU2717 at 2822.334 kb on - strand, within DVU2717 at 2822.970 kb on + strand at 2823.049 kb on + strand, within DVU2719 at 2823.070 kb on + strand, within DVU2719 at 2823.109 kb on - strand, within DVU2719 at 2823.115 kb on - strand, within DVU2719 at 2823.152 kb on + strand, within DVU2719 at 2823.208 kb on + strand, within DVU2719 at 2823.216 kb on - strand, within DVU2719 at 2823.231 kb on + strand, within DVU2719 at 2823.288 kb on + strand, within DVU2719 at 2823.357 kb on - strand at 2823.403 kb on + strand at 2823.436 kb on + strand at 2823.485 kb on + strand at 2823.506 kb on - strand at 2823.543 kb on + strand at 2823.627 kb on - strand, within DVU2720 at 2823.629 kb on - strand, within DVU2720 at 2823.632 kb on - strand, within DVU2720 at 2823.662 kb on - strand, within DVU2720 at 2823.843 kb on - strand, within DVU2720 at 2823.882 kb on + strand at 2823.931 kb on + strand, within DORF43366 at 2823.939 kb on - strand, within DORF43366 at 2823.941 kb on + strand, within DORF43366 at 2823.949 kb on - strand, within DORF43366 at 2823.950 kb on + strand, within DORF43366 at 2823.958 kb on + strand, within DORF43366 at 2824.011 kb on - strand, within DORF43366 at 2824.114 kb on + strand at 2824.123 kb on - strand at 2824.184 kb on + strand at 2824.216 kb on - strand at 2824.269 kb on + strand, within DVU2721
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfite (60/30-60 mM) remove 2,822,119 - DVU2717 0.12 -0.4 2,822,126 - DVU2717 0.13 -0.0 2,822,334 - DVU2717 0.38 -0.1 2,822,970 + -0.9 2,823,049 + DVU2719 0.17 -0.0 2,823,070 + DVU2719 0.23 +1.9 2,823,109 - DVU2719 0.33 +0.5 2,823,115 - DVU2719 0.35 -0.3 2,823,152 + DVU2719 0.45 +0.5 2,823,208 + DVU2719 0.59 +0.3 2,823,216 - DVU2719 0.62 +0.2 2,823,231 + DVU2719 0.66 -0.1 2,823,288 + DVU2719 0.81 +0.4 2,823,357 - +0.4 2,823,403 + +0.8 2,823,436 + -0.2 2,823,485 + -0.1 2,823,506 - -1.1 2,823,543 + -0.5 2,823,627 - DVU2720 0.21 -0.0 2,823,629 - DVU2720 0.22 +0.1 2,823,632 - DVU2720 0.23 +0.3 2,823,662 - DVU2720 0.32 -0.7 2,823,843 - DVU2720 0.87 -0.1 2,823,882 + -0.1 2,823,931 + DORF43366 0.18 -0.0 2,823,939 - DORF43366 0.24 -0.2 2,823,941 + DORF43366 0.25 +0.4 2,823,949 - DORF43366 0.31 -0.2 2,823,950 + DORF43366 0.32 +0.3 2,823,958 + DORF43366 0.38 +0.3 2,824,011 - DORF43366 0.77 +0.2 2,824,114 + -0.4 2,824,123 - -0.1 2,824,184 + -0.5 2,824,216 - -0.7 2,824,269 + DVU2721 0.12 -1.7
Or see this region's nucleotide sequence