Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2345

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
2,438,772	+	glnQ	DVU2343	0.22	-0.1
2,438,797	+	glnQ	DVU2343	0.25	-0.3
2,438,803	-	glnQ	DVU2343	0.26	+0.0
2,438,805	+	glnQ	DVU2343	0.26	+0.6
2,438,805	+	glnQ	DVU2343	0.26	-0.1
2,438,813	-	glnQ	DVU2343	0.27	+0.6
2,438,813	-	glnQ	DVU2343	0.27	+0.2
2,438,833	-	glnQ	DVU2343	0.30	+0.1
2,438,850	-	glnQ	DVU2343	0.33	+0.2
2,438,850	-	glnQ	DVU2343	0.33	-0.2
2,438,861	+	glnQ	DVU2343	0.34	+0.2
2,438,866	+	glnQ	DVU2343	0.35	+0.2
2,438,868	-	glnQ	DVU2343	0.35	-0.4
2,438,874	-	glnQ	DVU2343	0.36	-0.6
2,438,874	-	glnQ	DVU2343	0.36	+0.9
2,438,874	-	glnQ	DVU2343	0.36	+0.1
2,438,874	-	glnQ	DVU2343	0.36	-0.3
2,439,045	-	glnQ	DVU2343	0.59	-0.7
2,439,091	-	glnQ	DVU2343	0.66	-0.7
2,439,124	+	glnQ	DVU2343	0.70	-0.0
2,439,344	+				-0.1
2,439,357	+				-0.3
2,439,413	-				-0.2
2,439,544	-				-0.4
2,439,820	-		DVU2345	0.21	+1.4
2,439,853	+		DVU2345	0.32	-0.2
2,439,866	-		DVU2345	0.36	-0.8
2,439,988	-		DVU2345	0.74	+0.3
2,440,039	+		DVU2345	0.90	+0.0
2,440,108	-				+0.6
2,440,123	-				+0.0
2,440,278	-				-0.1
2,440,343	+				+0.6
2,440,551	+				-0.3
2,440,599	+				-1.1
2,440,602	-				-3.0
2,440,612	+				-1.8
2,440,612	-				-1.8
2,440,619	+				-2.7
2,440,665	-	argD	DVU2347	0.11	-2.6
2,440,711	-	argD	DVU2347	0.15	+0.3
2,440,721	-	argD	DVU2347	0.16	-1.6
2,440,721	-	argD	DVU2347	0.16	-0.3
2,440,738	-	argD	DVU2347	0.17	-0.9
2,440,747	-	argD	DVU2347	0.18	-1.5
2,440,750	-	argD	DVU2347	0.18	-2.0
2,440,809	+	argD	DVU2347	0.23	-2.1
2,440,841	-	argD	DVU2347	0.26	-1.8
2,441,000	+	argD	DVU2347	0.39	-1.4
2,441,008	-	argD	DVU2347	0.40	-1.9
2,441,015	+	argD	DVU2347	0.40	-1.5
2,441,015	+	argD	DVU2347	0.40	-2.9
2,441,023	-	argD	DVU2347	0.41	-2.2
2,441,035	+	argD	DVU2347	0.42	-1.1
2,441,068	-	argD	DVU2347	0.45	-1.4