Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2293

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
2,384,276	-		DVU2291	0.58	+0.4
2,384,352	+		DVU2291	0.64	-0.3
2,384,556	+		DVU2291	0.83	+0.7
2,384,716	-				-0.1
2,384,850	+	hypA	DVU2292	0.27	+0.9
2,384,863	-	hypA	DVU2292	0.31	-2.4
2,384,876	+	hypA	DVU2292	0.34	+0.4
2,384,949	+	hypA	DVU2292	0.55	-0.1
2,385,084	-				+0.5
2,385,304	+	cooF	DVU2293	0.37	-1.6
2,385,519	+	cooF	DVU2293	0.78	+0.7
2,385,568	+	cooF	DVU2293	0.88	+1.0
2,385,592	-				-1.6
2,385,639	-				+1.8
2,385,702	+				+0.3
2,385,746	-				-0.0
2,385,856	+				-0.3
2,385,864	-				+0.4
2,385,966	-		DVU2294	0.13	-0.2
2,385,997	-		DVU2294	0.16	+0.6
2,386,056	+		DVU2294	0.21	-0.5
2,386,216	-		DVU2294	0.36	-0.6
2,386,237	+		DVU2294	0.38	+0.9
2,386,242	+		DVU2294	0.38	-0.1
2,386,274	+		DVU2294	0.41	-0.1
2,386,274	+		DVU2294	0.41	-0.5
2,386,274	+		DVU2294	0.41	+0.1
2,386,282	-		DVU2294	0.42	-0.0
2,386,282	-		DVU2294	0.42	+0.7
2,386,295	-		DVU2294	0.43	+0.0
2,386,295	-		DVU2294	0.43	-0.4
2,386,384	-		DVU2294	0.51	-0.6
2,386,408	+		DVU2294	0.54	+0.0
2,386,500	-		DVU2294	0.62	+0.2
2,386,557	-		DVU2294	0.68	+0.1
2,386,630	-		DVU2294	0.74	+0.2