Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1940

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
2,011,535	+		DVU1939	0.24	+0.2
2,011,565	+		DVU1939	0.27	-0.6
2,011,600	-		DVU1939	0.30	+0.4
2,011,674	-		DVU1939	0.35	+0.8
2,011,674	-		DVU1939	0.35	-0.6
2,011,987	+		DVU1939	0.60	+0.6
2,012,150	+		DVU1939	0.72	-1.1
2,012,189	+		DVU1939	0.75	+0.1
2,012,189	-		DVU1939	0.75	+0.8
2,012,191	+		DVU1939	0.76	-1.5
2,012,225	+		DVU1939	0.78	+0.8
2,012,265	-		DVU1939	0.81	-0.1
2,012,523	-				-0.1
2,012,524	-				+0.3
2,012,693	-	glpA	DVU1940	0.12	+0.0
2,012,724	+	glpA	DVU1940	0.14	+0.1
2,012,736	+	glpA	DVU1940	0.14	-0.2
2,012,842	+	glpA	DVU1940	0.21	+0.3
2,012,864	-	glpA	DVU1940	0.23	+2.0
2,012,971	+	glpA	DVU1940	0.30	-0.1
2,013,158	+	glpA	DVU1940	0.42	+0.8
2,013,196	-	glpA	DVU1940	0.44	-0.3
2,013,199	-	glpA	DVU1940	0.44	-0.2
2,013,206	-	glpA	DVU1940	0.45	-0.2
2,013,279	+	glpA	DVU1940	0.49	+1.6
2,013,279	+	glpA	DVU1940	0.49	+2.4
2,013,392	-	glpA	DVU1940	0.57	+0.1
2,013,392	-	glpA	DVU1940	0.57	+0.5
2,013,416	+	glpA	DVU1940	0.58	+0.2
2,013,451	+	glpA	DVU1940	0.60	+0.4
2,013,518	-	glpA	DVU1940	0.65	+0.3
2,013,656	-	glpA	DVU1940	0.74	+0.6
2,013,820	+	glpA	DVU1940	0.84	-0.0
2,013,830	-	glpA	DVU1940	0.85	+0.4
2,013,864	+	glpA	DVU1940	0.87	+0.9
2,013,872	-	glpA	DVU1940	0.88	-0.3
2,013,872	-	glpA	DVU1940	0.88	+0.2
2,013,872	-	glpA	DVU1940	0.88	+0.7
2,013,907	+	glpA	DVU1940	0.90	-0.2
2,013,917	+				-2.1
2,013,917	-				+0.4
2,013,925	-				-1.9
2,013,997	+				+0.1
2,014,022	-				+1.1
2,014,070	+				-0.1
2,014,078	-				-0.3
2,014,197	-		DVU1941	0.13	-0.1
2,014,229	+		DVU1941	0.17	-0.2
2,014,229	+		DVU1941	0.17	-0.5
2,014,229	+		DVU1941	0.17	+0.6
2,014,237	-		DVU1941	0.18	+1.7
2,014,237	-		DVU1941	0.18	+0.0
2,014,265	+		DVU1941	0.22	-0.3
2,014,273	-		DVU1941	0.23	-0.7
2,014,309	-		DVU1941	0.27	+1.6
2,014,309	-		DVU1941	0.27	+0.1
2,014,509	-		DVU1941	0.53	+1.0
2,014,595	+		DVU1941	0.65	+0.2
2,014,603	-		DVU1941	0.66	-0.0
2,014,828	-				-0.0
2,014,914	-				-0.2