Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1263

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
1,350,331	+	pilT-1	DVU1262	0.28	-0.6
1,350,534	+	pilT-1	DVU1262	0.46	+0.2
1,350,620	+	pilT-1	DVU1262	0.54	-0.7
1,350,759	-	pilT-1	DVU1262	0.66	+0.2
1,350,920	+	pilT-1	DVU1262	0.81	-0.3
1,350,922	-	pilT-1	DVU1262	0.81	-0.2
1,350,972	-	pilT-1	DVU1262	0.85	-0.3
1,350,979	+	pilT-1	DVU1262	0.86	+0.5
1,351,014	+	pilT-1	DVU1262	0.89	+0.0
1,351,058	+				-0.8
1,351,065	+				+0.4
1,351,073	+				-0.0
1,351,139	+				-0.2
1,351,147	-				+0.2
1,351,183	-				-0.3
1,351,209	+				-0.1
1,351,269	-				+0.3
1,351,329	-				-0.6
1,351,527	+	pppA	DVU1263	0.27	+0.2
1,351,541	+	pppA	DVU1263	0.29	-0.5
1,351,615	-	pppA	DVU1263	0.38	+1.1
1,351,632	+	pppA	DVU1263	0.40	-1.6
1,351,790	-	pppA	DVU1263	0.60	+0.6
1,351,790	-	pppA	DVU1263	0.60	-0.1
1,351,839	+	pppA	DVU1263	0.66	+0.9
1,351,851	+	pppA	DVU1263	0.68	-0.3
1,351,861	-	pppA	DVU1263	0.69	+0.5
1,351,877	+	pppA	DVU1263	0.71	-2.1
1,352,138	+				+0.3
1,352,253	-				-0.4
1,352,282	-				-0.4
1,352,339	+				-0.1
1,352,342	-				+0.0
1,352,347	-				+0.1
1,352,402	-				+1.2
1,352,404	-				-0.8
1,352,406	-				-0.8
1,352,415	+				-0.2
1,352,496	-		DVU1264	0.10	+0.5
1,352,577	+		DVU1264	0.21	-0.2
1,352,605	-		DVU1264	0.24	-0.9
1,352,617	+		DVU1264	0.26	-0.6
1,352,642	-		DVU1264	0.29	-1.1
1,352,702	-		DVU1264	0.37	-0.6
1,352,745	+		DVU1264	0.43	-0.0
1,352,796	-		DVU1264	0.49	-0.3
1,353,004	-		DVU1264	0.77	+0.2
1,353,065	+		DVU1264	0.85	+1.0
1,353,075	+		DVU1264	0.86	-0.7
1,353,078	-		DVU1264	0.86	+0.3
1,353,083	-		DVU1264	0.87	-0.1
1,353,083	-		DVU1264	0.87	+0.1
1,353,109	+				-0.6