Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1001

Experiment: Formate/Acetate-Sulfite (60/30-60 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/30-60 mM)
1,096,452	-		DVU1000	0.32	-0.1
1,096,476	-		DVU1000	0.34	+0.6
1,096,497	+		DVU1000	0.36	+0.1
1,096,537	+		DVU1000	0.39	-0.3
1,096,540	-		DVU1000	0.39	-1.5
1,096,591	+		DVU1000	0.43	-0.2
1,096,717	+		DVU1000	0.54	-0.3
1,096,737	+		DVU1000	0.55	-0.5
1,096,737	+		DVU1000	0.55	-1.2
1,096,745	-		DVU1000	0.56	-0.6
1,096,808	+		DVU1000	0.61	-1.0
1,096,944	-		DVU1000	0.72	-0.1
1,096,982	-		DVU1000	0.75	-0.1
1,097,105	-		DVU1000	0.85	-0.3
1,097,120	-		DVU1000	0.87	+0.4
1,097,175	+				-0.4
1,097,180	+				-0.8
1,097,192	+				-1.2
1,097,204	+				-0.8
1,097,301	+				+0.0
1,097,309	-				-0.1
1,097,336	-				-0.3
1,097,380	-				+0.0
1,097,478	+	b0965	DVU1001	0.12	+0.8
1,097,573	-	b0965	DVU1001	0.36	+0.9
1,097,575	+	b0965	DVU1001	0.36	+0.4
1,097,589	+	b0965	DVU1001	0.40	+1.4
1,097,682	-	b0965	DVU1001	0.63	+0.1
1,097,729	+	b0965	DVU1001	0.74	+0.1
1,097,737	-	b0965	DVU1001	0.76	+0.1
1,097,737	-	b0965	DVU1001	0.76	-0.9
1,097,768	-	b0965	DVU1001	0.84	-0.5
1,097,768	-	b0965	DVU1001	0.84	-0.1
1,097,768	-	b0965	DVU1001	0.84	-0.2
1,097,781	+	b0965	DVU1001	0.87	+0.2
1,097,792	+				+1.0
1,097,843	+				-0.2
1,097,896	+		DVU1002	0.15	-0.3
1,097,943	+		DVU1002	0.25	-0.2
1,097,943	+		DVU1002	0.25	+0.3
1,097,943	+		DVU1002	0.25	+0.0
1,097,943	+		DVU1002	0.25	+1.3
1,097,943	+		DVU1002	0.25	+0.2
1,097,943	+		DVU1002	0.25	+0.3
1,097,945	+		DVU1002	0.25	-0.2
1,097,951	-		DVU1002	0.27	+0.7
1,097,951	-		DVU1002	0.27	-0.5
1,097,951	-		DVU1002	0.27	-0.4
1,098,020	-		DVU1002	0.42	-0.3
1,098,040	+		DVU1002	0.46	+0.3
1,098,045	+		DVU1002	0.47	-0.1
1,098,053	-		DVU1002	0.49	-0.2
1,098,053	-		DVU1002	0.49	-0.1
1,098,130	+		DVU1002	0.66	+0.0
1,098,201	+		DVU1002	0.82	+0.4
1,098,226	+		DVU1002	0.87	-0.4
1,098,227	-		DVU1002	0.87	+0.0
1,098,255	-				-0.8
1,098,332	-				-0.1
1,098,410	-		DVU1003	0.11	+0.1
1,098,548	-		DVU1003	0.25	-0.1
1,098,570	-		DVU1003	0.27	-0.0
1,098,612	-		DVU1003	0.32	+0.4
1,098,675	+		DVU1003	0.38	+0.2
1,098,683	-		DVU1003	0.39	+0.2
1,098,742	+		DVU1003	0.45	+0.2
1,098,766	-		DVU1003	0.47	+0.7