Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0841 and DVU0842 are separated by 108 nucleotides DVU0842 and DVU0843 overlap by 11 nucleotides
DVU0841: DVU0841 - aspartate aminotransferase, putative (TIGR), at 929,194 to 930,375
DVU0841
DVU0842: DVU0842 - hypothetical protein (TIGR), at 930,484 to 930,714
DVU0842
DVU0843: DVU0843 - hypothetical protein (TIGR), at 930,704 to 932,302
DVU0843
Position (kb) 930
931 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 929.497 kb on + strand, within DVU0841 at 929.660 kb on - strand, within DVU0841 at 929.691 kb on + strand, within DVU0841 at 929.760 kb on - strand, within DVU0841 at 929.762 kb on + strand, within DVU0841 at 929.791 kb on + strand, within DVU0841 at 929.875 kb on + strand, within DVU0841 at 929.917 kb on - strand, within DVU0841 at 929.930 kb on + strand, within DVU0841 at 929.995 kb on - strand, within DVU0841 at 930.013 kb on + strand, within DVU0841 at 930.031 kb on - strand, within DVU0841 at 930.043 kb on - strand, within DVU0841 at 930.064 kb on - strand, within DVU0841 at 930.088 kb on - strand, within DVU0841 at 930.092 kb on + strand, within DVU0841 at 930.253 kb on + strand, within DVU0841 at 930.334 kb on - strand at 930.377 kb on - strand at 930.610 kb on - strand, within DVU0842 at 930.642 kb on - strand, within DVU0842 at 930.786 kb on + strand at 930.794 kb on - strand at 931.106 kb on + strand, within DVU0843 at 931.200 kb on + strand, within DVU0843 at 931.245 kb on + strand, within DVU0843 at 931.262 kb on - strand, within DVU0843 at 931.263 kb on + strand, within DVU0843 at 931.305 kb on + strand, within DVU0843 at 931.419 kb on + strand, within DVU0843 at 931.446 kb on + strand, within DVU0843 at 931.488 kb on + strand, within DVU0843 at 931.551 kb on + strand, within DVU0843 at 931.559 kb on - strand, within DVU0843 at 931.605 kb on + strand, within DVU0843 at 931.610 kb on + strand, within DVU0843 at 931.712 kb on + strand, within DVU0843
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfite (60/30-60 mM) remove 929,497 + DVU0841 0.26 -1.7 929,660 - DVU0841 0.39 -0.8 929,691 + DVU0841 0.42 -1.5 929,760 - DVU0841 0.48 -0.5 929,762 + DVU0841 0.48 -0.4 929,791 + DVU0841 0.51 -0.0 929,875 + DVU0841 0.58 -0.7 929,917 - DVU0841 0.61 -0.5 929,930 + DVU0841 0.62 -0.4 929,995 - DVU0841 0.68 -0.8 930,013 + DVU0841 0.69 -0.6 930,031 - DVU0841 0.71 -0.6 930,043 - DVU0841 0.72 -1.5 930,064 - DVU0841 0.74 +0.1 930,088 - DVU0841 0.76 -0.4 930,092 + DVU0841 0.76 -0.6 930,253 + DVU0841 0.90 -0.5 930,334 - -1.1 930,377 - -0.1 930,610 - DVU0842 0.55 +0.0 930,642 - DVU0842 0.68 +0.8 930,786 + -0.5 930,794 - -0.4 931,106 + DVU0843 0.25 -0.8 931,200 + DVU0843 0.31 +0.2 931,245 + DVU0843 0.34 +2.0 931,262 - DVU0843 0.35 -0.4 931,263 + DVU0843 0.35 +2.9 931,305 + DVU0843 0.38 +0.2 931,419 + DVU0843 0.45 +0.6 931,446 + DVU0843 0.46 +1.4 931,488 + DVU0843 0.49 +0.5 931,551 + DVU0843 0.53 +0.6 931,559 - DVU0843 0.53 -1.4 931,605 + DVU0843 0.56 -0.5 931,610 + DVU0843 0.57 -0.1 931,712 + DVU0843 0.63 -3.0
Or see this region's nucleotide sequence