Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DORF14945
Experiment: Formate/Acetate-Sulfite (60/30-60 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (60/30-60 mM) |
---|---|---|---|---|---|
remove | |||||
2,083,783 | - | DVU2001 | 0.80 | -0.3 | |
2,083,916 | + | -0.3 | |||
2,083,916 | + | -0.0 | |||
2,083,961 | + | +0.7 | |||
2,084,357 | - | -0.0 | |||
2,084,376 | + | +0.2 | |||
2,084,545 | + | -0.2 | |||
2,084,692 | - | DORF14945 | 0.16 | -0.0 | |
2,084,692 | - | DORF14945 | 0.16 | +0.3 | |
2,084,846 | - | +0.2 | |||
2,085,215 | - | DVU2003 | 0.19 | +0.3 | |
2,085,217 | - | DVU2003 | 0.19 | -0.2 | |
2,085,236 | + | DVU2003 | 0.21 | -0.3 | |
2,085,242 | - | DVU2003 | 0.21 | -1.2 | |
2,085,249 | - | DVU2003 | 0.22 | -0.2 | |
2,085,268 | + | DVU2003 | 0.23 | -0.4 | |
2,085,498 | + | DVU2003 | 0.41 | -0.8 | |
2,085,625 | + | DVU2003 | 0.51 | +0.0 | |
2,085,640 | - | DVU2003 | 0.52 | -2.0 | |
2,085,740 | + | DVU2003 | 0.60 | +0.2 | |
2,085,756 | + | DVU2003 | 0.62 | -0.2 | |
2,085,764 | - | DVU2003 | 0.62 | -0.7 | |
2,085,766 | + | DVU2003 | 0.62 | -0.5 | |
2,085,787 | + | DVU2003 | 0.64 | -1.0 | |
2,085,790 | - | DVU2003 | 0.64 | +1.3 |
Or see this region's nucleotide sequence