Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4207

Experiment: library passed through aphids in food, 72 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	library passed through aphids in food, 72 hours
5,008,905	+				+2.8
5,008,905	+				-0.5
5,008,905	+				-0.9
5,008,906	-				-0.1
5,008,906	-				-0.7
5,008,906	-				-0.8
5,008,923	+		Psyr_4206	0.11	-0.5
5,008,923	+		Psyr_4206	0.11	+0.3
5,008,924	-		Psyr_4206	0.11	-0.6
5,008,924	-		Psyr_4206	0.11	+1.4
5,008,925	+		Psyr_4206	0.11	-1.7
5,008,925	+		Psyr_4206	0.11	-0.5
5,008,925	+		Psyr_4206	0.11	-1.3
5,008,925	+		Psyr_4206	0.11	+1.2
5,008,925	+		Psyr_4206	0.11	-0.0
5,008,925	+		Psyr_4206	0.11	-0.5
5,008,925	+		Psyr_4206	0.11	-0.5
5,008,925	+		Psyr_4206	0.11	-2.5
5,008,925	+		Psyr_4206	0.11	-3.6
5,008,925	+		Psyr_4206	0.11	-0.5
5,008,926	-		Psyr_4206	0.12	+0.2
5,008,926	-		Psyr_4206	0.12	-0.9
5,008,926	-		Psyr_4206	0.12	-1.3
5,008,926	-		Psyr_4206	0.12	-0.3
5,008,926	-		Psyr_4206	0.12	+1.6
5,008,926	-		Psyr_4206	0.12	-2.4
5,008,926	-		Psyr_4206	0.12	+0.0
5,008,926	-		Psyr_4206	0.12	+1.9
5,008,926	-		Psyr_4206	0.12	-0.7
5,008,926	-		Psyr_4206	0.12	+4.1
5,008,926	-		Psyr_4206	0.12	+3.3
5,008,926	-		Psyr_4206	0.12	-0.6
5,008,926	-		Psyr_4206	0.12	+1.5
5,008,980	+		Psyr_4206	0.16	-1.3
5,008,981	-		Psyr_4206	0.17	+0.5
5,009,020	+		Psyr_4206	0.20	+0.4
5,009,020	+		Psyr_4206	0.20	+0.3
5,009,020	+		Psyr_4206	0.20	+1.5
5,009,020	+		Psyr_4206	0.20	+1.0
5,009,020	+		Psyr_4206	0.20	+1.5
5,009,020	+		Psyr_4206	0.20	-1.5
5,009,020	+		Psyr_4206	0.20	-2.1
5,009,020	+		Psyr_4206	0.20	-1.9
5,009,020	+		Psyr_4206	0.20	+0.2
5,009,020	+		Psyr_4206	0.20	-0.5
5,009,020	+		Psyr_4206	0.20	-0.4
5,009,020	+		Psyr_4206	0.20	-0.7
5,009,020	+		Psyr_4206	0.20	-1.3
5,009,020	+		Psyr_4206	0.20	-1.2
5,009,020	+		Psyr_4206	0.20	-0.8
5,009,020	+		Psyr_4206	0.20	+1.4
5,009,020	+		Psyr_4206	0.20	-2.0
5,009,020	+		Psyr_4206	0.20	-1.1
5,009,020	+		Psyr_4206	0.20	+1.1
5,009,020	+		Psyr_4206	0.20	-1.6
5,009,020	+		Psyr_4206	0.20	-2.0
5,009,020	+		Psyr_4206	0.20	-0.2
5,009,020	+		Psyr_4206	0.20	-0.9
5,009,020	+		Psyr_4206	0.20	-0.2
5,009,020	+		Psyr_4206	0.20	+1.5
5,009,021	-		Psyr_4206	0.20	-1.3
5,009,021	-		Psyr_4206	0.20	-2.3
5,009,021	-		Psyr_4206	0.20	-0.8
5,009,021	-		Psyr_4206	0.20	-1.6
5,009,021	-		Psyr_4206	0.20	+2.4
5,009,021	-		Psyr_4206	0.20	-1.8
5,009,021	-		Psyr_4206	0.20	-0.6
5,009,021	-		Psyr_4206	0.20	-2.1
5,009,021	-		Psyr_4206	0.20	-1.3
5,009,021	-		Psyr_4206	0.20	+0.4
5,009,021	-		Psyr_4206	0.20	-0.0
5,009,021	-		Psyr_4206	0.20	-1.1
5,009,021	-		Psyr_4206	0.20	-0.5
5,009,021	-		Psyr_4206	0.20	+1.3
5,009,021	-		Psyr_4206	0.20	-0.5
5,009,021	-		Psyr_4206	0.20	-1.3
5,009,021	-		Psyr_4206	0.20	-0.4
5,009,021	-		Psyr_4206	0.20	+0.0
5,009,021	-		Psyr_4206	0.20	-0.9
5,009,021	-		Psyr_4206	0.20	-1.9
5,009,129	+		Psyr_4206	0.30	-2.0
5,009,129	+		Psyr_4206	0.30	+0.3
5,009,130	-		Psyr_4206	0.30	-1.4
5,009,130	-		Psyr_4206	0.30	-0.9
5,009,146	-		Psyr_4206	0.32	+0.4
5,009,152	+		Psyr_4206	0.32	+2.4
5,009,152	+		Psyr_4206	0.32	-2.0
5,009,152	+		Psyr_4206	0.32	-2.5
5,009,152	+		Psyr_4206	0.32	+0.6
5,009,152	+		Psyr_4206	0.32	+0.7
5,009,153	-		Psyr_4206	0.32	-0.9
5,009,153	-		Psyr_4206	0.32	+0.1
5,009,153	-		Psyr_4206	0.32	+0.5
5,009,153	-		Psyr_4206	0.32	-0.7
5,009,225	+		Psyr_4206	0.39	+0.5
5,009,225	+		Psyr_4206	0.39	-1.0
5,009,225	+		Psyr_4206	0.39	+0.6
5,009,225	+		Psyr_4206	0.39	-1.9
5,009,225	+		Psyr_4206	0.39	-1.4
5,009,225	+		Psyr_4206	0.39	-0.8
5,009,225	+		Psyr_4206	0.39	-0.2
5,009,225	+		Psyr_4206	0.39	+0.6
5,009,225	+		Psyr_4206	0.39	+0.1
5,009,226	-		Psyr_4206	0.39	-2.1
5,009,226	-		Psyr_4206	0.39	+0.1
5,009,226	-		Psyr_4206	0.39	-0.5
5,009,226	-		Psyr_4206	0.39	-0.4
5,009,226	-		Psyr_4206	0.39	+0.0
5,009,226	-		Psyr_4206	0.39	-0.3
5,009,226	-		Psyr_4206	0.39	+0.2
5,009,226	-		Psyr_4206	0.39	-0.3
5,009,226	-		Psyr_4206	0.39	+0.3
5,009,236	+		Psyr_4206	0.40	+0.8
5,009,236	+		Psyr_4206	0.40	-0.0
5,009,236	+		Psyr_4206	0.40	+0.5
5,009,236	+		Psyr_4206	0.40	-0.0
5,009,236	+		Psyr_4206	0.40	-2.1
5,009,236	+		Psyr_4206	0.40	+0.8
5,009,236	+		Psyr_4206	0.40	+2.0
5,009,237	-		Psyr_4206	0.40	-0.5
5,009,237	-		Psyr_4206	0.40	+0.3
5,009,237	-		Psyr_4206	0.40	-1.7
5,009,237	-		Psyr_4206	0.40	+0.2
5,009,237	-		Psyr_4206	0.40	-1.4
5,009,237	-		Psyr_4206	0.40	+1.9
5,009,298	+		Psyr_4206	0.46	-0.5
5,009,298	+		Psyr_4206	0.46	-1.3
5,009,298	+		Psyr_4206	0.46	-2.3
5,009,299	-		Psyr_4206	0.46	+2.7
5,009,330	-		Psyr_4206	0.49	-1.5
5,009,463	+		Psyr_4206	0.61	+1.5
5,009,464	-		Psyr_4206	0.61	-2.8
5,009,469	+		Psyr_4206	0.62	-1.2
5,009,469	+		Psyr_4206	0.62	+0.4
5,009,469	+		Psyr_4206	0.62	-1.0
5,009,470	-		Psyr_4206	0.62	-0.6
5,009,470	-		Psyr_4206	0.62	-0.3
5,009,470	-		Psyr_4206	0.62	-0.7
5,009,512	-		Psyr_4206	0.65	+0.0
5,009,512	-		Psyr_4206	0.65	-0.7
5,009,619	+		Psyr_4206	0.75	-3.2
5,009,619	+		Psyr_4206	0.75	-0.7
5,009,620	-		Psyr_4206	0.75	-0.3
5,009,620	-		Psyr_4206	0.75	+0.5
5,009,620	-		Psyr_4206	0.75	-0.5
5,009,621	+		Psyr_4206	0.76	-1.2
5,009,621	+		Psyr_4206	0.76	+0.6
5,009,621	+		Psyr_4206	0.76	+0.1
5,009,621	+		Psyr_4206	0.76	-2.1
5,009,621	+		Psyr_4206	0.76	+0.4
5,009,621	+		Psyr_4206	0.76	-0.2
5,009,621	+		Psyr_4206	0.76	-1.0
5,009,621	+		Psyr_4206	0.76	-2.1
5,009,621	+		Psyr_4206	0.76	+1.4
5,009,621	+		Psyr_4206	0.76	-1.2
5,009,621	+		Psyr_4206	0.76	-1.6
5,009,621	+		Psyr_4206	0.76	+2.5
5,009,621	+		Psyr_4206	0.76	+1.6
5,009,621	+		Psyr_4206	0.76	-2.5
5,009,621	+		Psyr_4206	0.76	+0.7
5,009,622	-		Psyr_4206	0.76	+1.6
5,009,622	-		Psyr_4206	0.76	+1.0
5,009,622	-		Psyr_4206	0.76	-0.3
5,009,622	-		Psyr_4206	0.76	-0.1
5,009,622	-		Psyr_4206	0.76	-0.5
5,009,622	-		Psyr_4206	0.76	+0.1
5,009,622	-		Psyr_4206	0.76	+0.6
5,009,622	-		Psyr_4206	0.76	-0.0
5,009,622	-		Psyr_4206	0.76	-0.6
5,009,622	-		Psyr_4206	0.76	+1.0
5,009,622	-		Psyr_4206	0.76	-0.1
5,009,622	-		Psyr_4206	0.76	+1.2
5,009,622	-		Psyr_4206	0.76	+1.0
5,009,622	-		Psyr_4206	0.76	-2.4
5,009,622	-		Psyr_4206	0.76	-0.4
5,009,622	-		Psyr_4206	0.76	+1.1
5,009,622	-		Psyr_4206	0.76	-1.5
5,009,622	-		Psyr_4206	0.76	-0.3
5,009,622	-		Psyr_4206	0.76	-0.5
5,009,622	-		Psyr_4206	0.76	-1.4
5,009,622	-		Psyr_4206	0.76	+1.5
5,009,622	-		Psyr_4206	0.76	-0.7
5,009,622	-		Psyr_4206	0.76	-0.5
5,009,761	+		Psyr_4206	0.88	-1.6
5,009,761	+				-0.0
5,009,762	-		Psyr_4206	0.88	-0.8
5,009,762	-		Psyr_4206	0.88	-0.8
5,009,762	-		Psyr_4206	0.88	+0.9
5,009,762	-		Psyr_4206	0.88	-0.1
5,009,762	-		Psyr_4206	0.88	-1.5
5,009,762	-		Psyr_4206	0.88	-2.4
5,009,762	-		Psyr_4206	0.88	-2.1
5,009,764	+		Psyr_4206	0.89	+0.7
5,009,764	+		Psyr_4206	0.89	-1.5
5,009,765	-		Psyr_4206	0.89	+0.3
5,009,765	-		Psyr_4206	0.89	-1.9
5,009,786	+				+0.5
5,009,786	+				-0.5
5,009,786	+				-1.3
5,009,786	+				-0.0
5,009,786	+				+0.5
5,009,786	+				-1.5
5,009,786	+				-3.0
5,009,786	+				+0.4
5,009,786	+				-0.7
5,009,786	+				+0.8
5,009,786	+				-1.0
5,009,787	-				-1.4
5,009,787	-				-0.2
5,009,787	-				-1.2
5,009,787	-				-2.7
5,009,787	-				-1.4
5,009,787	-				+0.1
5,009,787	-				+2.5
5,009,787	-				-1.4
5,009,787	-				-0.9
5,009,787	-				-1.3
5,009,787	-				-0.5
5,009,787	-				-2.2
5,009,787	-				-1.5
5,009,787	-				-2.6
5,009,787	-				-1.5
5,009,787	-				+0.1
5,009,790	+				-0.9
5,009,791	-				-0.1
5,009,874	+				+2.5
5,009,875	-				+0.5
5,009,884	+				-1.0
5,009,997	+		Psyr_4207	0.22	-1.2
5,009,997	+		Psyr_4207	0.22	-1.2
5,009,998	-		Psyr_4207	0.22	-0.4
5,009,998	-		Psyr_4207	0.22	-1.0
5,009,998	-		Psyr_4207	0.22	-1.5
5,009,998	-		Psyr_4207	0.22	-0.8
5,010,026	+		Psyr_4207	0.29	+0.2
5,010,026	+		Psyr_4207	0.29	+0.2
5,010,026	+		Psyr_4207	0.29	-1.5
5,010,026	+		Psyr_4207	0.29	-1.9
5,010,026	+		Psyr_4207	0.29	+0.2
5,010,027	-		Psyr_4207	0.29	-1.3
5,010,027	-		Psyr_4207	0.29	+0.4
5,010,027	-		Psyr_4207	0.29	-0.2
5,010,027	-		Psyr_4207	0.29	+0.5
5,010,027	-		Psyr_4207	0.29	-0.9
5,010,027	-		Psyr_4207	0.29	-1.4
5,010,027	-		Psyr_4207	0.29	+0.9
5,010,027	-				+3.1
5,010,030	+		Psyr_4207	0.30	+0.6
5,010,218	+		Psyr_4207	0.73	-1.4
5,010,218	+		Psyr_4207	0.73	+0.7
5,010,299	+				-0.3
5,010,300	-				-1.9
5,010,300	-				-0.5
5,010,300	-				+0.3
5,010,338	+				-0.2
5,010,338	+				-0.9
5,010,374	-				+1.3
5,010,442	+				+0.0
5,010,443	-				-0.3
5,010,443	-				-1.4
5,010,446	-				+1.5
5,010,446	-				+0.3
5,010,476	+				+0.1
5,010,477	-				-0.6
5,010,519	+				-1.5
5,010,519	+				+1.0
5,010,520	-				+0.3
5,010,592	-				+0.5
5,010,597	+				-0.9
5,010,597	+				-1.5
5,010,598	-				-0.9
5,010,717	+				-0.8
5,010,718	-				-0.6
5,010,718	-				+0.6
5,010,718	-				-0.5
5,010,866	+				+0.1
5,010,867	-				+1.0
5,010,968	+		Psyr_4208	0.11	-0.2
5,010,968	+		Psyr_4208	0.11	-0.4
5,011,010	-		Psyr_4208	0.13	-1.4
5,011,139	+		Psyr_4208	0.18	+0.9
5,011,140	-		Psyr_4208	0.18	-0.4
5,011,140	-		Psyr_4208	0.18	-0.7
5,011,140	-		Psyr_4208	0.18	-0.5
5,011,269	-		Psyr_4208	0.24	+0.1