Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4252

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
4,946,976	+		Pf6N2E2_4251	0.51	+0.1
4,946,977	-		Pf6N2E2_4251	0.51	+1.2
4,946,985	+		Pf6N2E2_4251	0.52	+0.1
4,946,986	-		Pf6N2E2_4251	0.52	-0.7
4,947,051	-		Pf6N2E2_4251	0.56	-0.0
4,947,051	-		Pf6N2E2_4251	0.56	+1.1
4,947,219	+		Pf6N2E2_4251	0.68	-0.3
4,947,219	+		Pf6N2E2_4251	0.68	-0.9
4,947,219	+		Pf6N2E2_4251	0.68	+0.5
4,947,219	+		Pf6N2E2_4251	0.68	-0.8
4,947,219	+		Pf6N2E2_4251	0.68	+0.1
4,947,219	+		Pf6N2E2_4251	0.68	-2.1
4,947,220	-		Pf6N2E2_4251	0.68	+1.6
4,947,220	-		Pf6N2E2_4251	0.68	+0.9
4,947,220	-		Pf6N2E2_4251	0.68	-0.5
4,947,220	-		Pf6N2E2_4251	0.68	-0.8
4,947,485	+		Pf6N2E2_4251	0.87	-0.7
4,947,485	+		Pf6N2E2_4251	0.87	+1.4
4,947,485	+		Pf6N2E2_4251	0.87	-0.2
4,947,485	+		Pf6N2E2_4251	0.87	+0.4
4,947,485	+		Pf6N2E2_4251	0.87	+1.3
4,947,486	-		Pf6N2E2_4251	0.87	-1.8
4,947,486	-		Pf6N2E2_4251	0.87	+1.2
4,947,486	-		Pf6N2E2_4251	0.87	-1.6
4,947,616	-				+1.0
4,947,617	+				+1.0
4,947,618	-				+0.8
4,947,653	+				+0.2
4,947,653	+				+0.9
4,947,653	+				-1.8
4,947,654	-				-0.3
4,947,654	-				-0.0
4,947,654	-				-1.2
4,947,654	-				+1.3
4,947,654	-				+0.1
4,947,706	+				+1.0
4,947,738	+				-0.7
4,947,738	+				-0.1
4,947,738	+				+0.3
4,947,738	+				+1.0
4,947,739	-				+1.4
4,947,739	-				-1.1
4,947,739	-				+1.0
4,947,739	-				-0.0
4,947,739	-				-0.9
4,947,805	+				+0.9
4,947,817	-				+1.0
4,947,817	-				+0.5
4,947,818	+				+0.2
4,947,819	-				-0.7
4,947,821	-				+0.7
4,947,821	-				+0.7
4,947,883	+				-1.4
4,947,883	+				+0.2
4,947,883	+				+0.6
4,947,883	+				-0.7
4,947,884	-				+0.2
4,947,884	-				+0.8
4,947,884	-				-0.3
4,947,884	-				+0.3
4,948,014	+				-1.9
4,948,141	+		Pf6N2E2_4252	0.13	-1.1
4,948,211	+		Pf6N2E2_4252	0.17	-0.5
4,948,211	+		Pf6N2E2_4252	0.17	+0.0
4,948,211	+		Pf6N2E2_4252	0.17	-2.1
4,948,211	+		Pf6N2E2_4252	0.17	-1.4
4,948,212	-		Pf6N2E2_4252	0.17	-1.3
4,948,212	-		Pf6N2E2_4252	0.17	-1.2
4,948,212	-		Pf6N2E2_4252	0.17	-1.4
4,948,212	-		Pf6N2E2_4252	0.17	-0.2
4,948,308	+		Pf6N2E2_4252	0.22	-0.4
4,948,308	+		Pf6N2E2_4252	0.22	+0.7
4,948,414	-		Pf6N2E2_4252	0.27	+0.3
4,948,416	+		Pf6N2E2_4252	0.27	-0.3
4,948,416	+		Pf6N2E2_4252	0.27	-0.9
4,948,416	+		Pf6N2E2_4252	0.27	-1.0
4,948,417	-		Pf6N2E2_4252	0.27	-0.1
4,948,701	+		Pf6N2E2_4252	0.42	+0.9
4,948,701	+		Pf6N2E2_4252	0.42	+0.6
4,948,702	-		Pf6N2E2_4252	0.42	-0.1
4,948,702	-		Pf6N2E2_4252	0.42	-1.3
4,948,793	+		Pf6N2E2_4252	0.46	+0.1
4,948,793	+		Pf6N2E2_4252	0.46	-3.1
4,948,793	+		Pf6N2E2_4252	0.46	-0.6
4,948,794	-		Pf6N2E2_4252	0.46	-2.8
4,948,794	-		Pf6N2E2_4252	0.46	-1.2
4,948,794	-		Pf6N2E2_4252	0.46	-1.3
4,948,892	+		Pf6N2E2_4252	0.51	-0.5
4,948,892	+		Pf6N2E2_4252	0.51	-0.5
4,948,892	+		Pf6N2E2_4252	0.51	-0.9
4,948,892	+		Pf6N2E2_4252	0.51	+0.3
4,948,893	-		Pf6N2E2_4252	0.51	-2.3
4,948,893	-		Pf6N2E2_4252	0.51	+0.2
4,948,893	-		Pf6N2E2_4252	0.51	-0.8
4,948,893	-		Pf6N2E2_4252	0.51	+0.6
4,948,893	-		Pf6N2E2_4252	0.51	+0.6
4,948,893	-		Pf6N2E2_4252	0.51	+0.3
4,949,225	+		Pf6N2E2_4252	0.68	-0.5
4,949,225	+		Pf6N2E2_4252	0.68	+0.5
4,949,225	+		Pf6N2E2_4252	0.68	-0.3
4,949,226	-		Pf6N2E2_4252	0.68	+0.2
4,949,681	+				-0.0
4,949,681	+				+0.0
4,949,681	+				+1.6
4,949,682	-				+2.7
4,949,682	-				+1.2
4,949,682	-				+0.5
4,949,779	+				+0.4
4,949,993	+		Pf6N2E2_4253	0.15	+0.5
4,950,048	+		Pf6N2E2_4253	0.20	+0.7
4,950,049	-		Pf6N2E2_4253	0.20	-0.2
4,950,162	+		Pf6N2E2_4253	0.31	+0.3
4,950,162	+		Pf6N2E2_4253	0.31	-0.9
4,950,162	+		Pf6N2E2_4253	0.31	-0.5
4,950,162	+		Pf6N2E2_4253	0.31	+2.3
4,950,163	-		Pf6N2E2_4253	0.31	+0.7
4,950,163	-		Pf6N2E2_4253	0.31	-0.1
4,950,163	-		Pf6N2E2_4253	0.31	-0.8
4,950,223	+		Pf6N2E2_4253	0.37	-0.3
4,950,223	+		Pf6N2E2_4253	0.37	+0.6
4,950,223	+		Pf6N2E2_4253	0.37	+1.0
4,950,223	+		Pf6N2E2_4253	0.37	+0.4
4,950,223	+		Pf6N2E2_4253	0.37	-0.7
4,950,378	+		Pf6N2E2_4253	0.51	-0.0
4,950,460	+		Pf6N2E2_4253	0.59	-1.9
4,950,460	+		Pf6N2E2_4253	0.59	-0.7
4,950,460	+		Pf6N2E2_4253	0.59	-0.5
4,950,461	-		Pf6N2E2_4253	0.59	+1.3
4,950,461	-		Pf6N2E2_4253	0.59	+0.2
4,950,461	-		Pf6N2E2_4253	0.59	-1.3
4,950,689	+		Pf6N2E2_4253	0.81	+0.4
4,950,689	+		Pf6N2E2_4253	0.81	-0.8
4,950,689	+		Pf6N2E2_4253	0.81	-0.4
4,950,690	-		Pf6N2E2_4253	0.81	-0.3
4,950,690	-		Pf6N2E2_4253	0.81	+0.8
4,950,706	+		Pf6N2E2_4253	0.83	+0.9
4,950,706	+		Pf6N2E2_4253	0.83	-0.5
4,950,706	+		Pf6N2E2_4253	0.83	+1.1
4,950,706	+		Pf6N2E2_4253	0.83	+1.0
4,950,706	+		Pf6N2E2_4253	0.83	-0.4
4,950,706	+		Pf6N2E2_4253	0.83	-0.3
4,950,707	-		Pf6N2E2_4253	0.83	+0.4
4,950,707	-		Pf6N2E2_4253	0.83	-0.2
4,950,707	-		Pf6N2E2_4253	0.83	-0.3
4,950,707	-		Pf6N2E2_4253	0.83	-1.0
4,950,707	-		Pf6N2E2_4253	0.83	-0.4
4,950,707	-		Pf6N2E2_4253	0.83	-0.5
4,950,707	-		Pf6N2E2_4253	0.83	+0.6
4,950,739	+		Pf6N2E2_4253	0.86	+0.9
4,950,740	-		Pf6N2E2_4253	0.86	+0.7
4,950,740	-		Pf6N2E2_4253	0.86	+0.6
4,950,740	-		Pf6N2E2_4253	0.86	+0.3