Strain Fitness in Marinobacter adhaerens HP15 around HP15_149

Experiment: Glycine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_147 and HP15_148 overlap by 4 nucleotidesHP15_148 and HP15_149 are separated by 35 nucleotidesHP15_149 and HP15_150 are separated by 27 nucleotidesHP15_150 and HP15_151 are separated by 46 nucleotides HP15_147: HP15_147 - conserved hypothetical protein, membrane, at 149,688 to 150,164 _147 HP15_148: HP15_148 - secreted protein, at 150,161 to 150,655 _148 HP15_149: HP15_149 - conserved hypothetical protein, at 150,691 to 151,485 _149 HP15_150: HP15_150 - hypothetical protein, at 151,513 to 151,749 _150 HP15_151: HP15_151 - conserved hypothetical protein, membrane, at 151,796 to 152,884 _151 Position (kb) 150 151 152Strain fitness (log2 ratio) -1 0 1 2 3at 149.748 kb on + strand, within HP15_147at 149.772 kb on + strand, within HP15_147at 149.784 kb on + strand, within HP15_147at 149.792 kb on - strand, within HP15_147at 149.903 kb on + strand, within HP15_147at 149.951 kb on - strand, within HP15_147at 149.973 kb on + strand, within HP15_147at 149.983 kb on - strand, within HP15_147at 149.983 kb on - strand, within HP15_147at 150.003 kb on + strand, within HP15_147at 150.017 kb on + strand, within HP15_147at 150.025 kb on - strand, within HP15_147at 150.205 kb on - strandat 150.215 kb on - strand, within HP15_148at 150.338 kb on + strand, within HP15_148at 150.338 kb on + strand, within HP15_148at 150.425 kb on - strand, within HP15_148at 150.524 kb on - strand, within HP15_148at 150.539 kb on + strand, within HP15_148at 150.552 kb on - strand, within HP15_148at 150.579 kb on + strand, within HP15_148at 150.594 kb on + strand, within HP15_148at 150.594 kb on + strand, within HP15_148at 150.602 kb on - strand, within HP15_148at 150.602 kb on - strand, within HP15_148at 150.706 kb on + strandat 150.706 kb on + strandat 150.706 kb on + strandat 150.706 kb on + strandat 150.706 kb on + strandat 150.714 kb on - strandat 150.751 kb on - strandat 150.758 kb on - strandat 150.848 kb on - strand, within HP15_149at 150.849 kb on - strand, within HP15_149at 150.915 kb on + strand, within HP15_149at 150.943 kb on + strand, within HP15_149at 150.953 kb on - strand, within HP15_149at 150.953 kb on - strand, within HP15_149at 151.014 kb on + strand, within HP15_149at 151.014 kb on + strand, within HP15_149at 151.014 kb on + strand, within HP15_149at 151.022 kb on - strand, within HP15_149at 151.024 kb on + strand, within HP15_149at 151.024 kb on + strand, within HP15_149at 151.024 kb on + strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.067 kb on - strand, within HP15_149at 151.148 kb on + strand, within HP15_149at 151.196 kb on + strand, within HP15_149at 151.276 kb on + strand, within HP15_149at 151.276 kb on + strand, within HP15_149at 151.284 kb on - strand, within HP15_149at 151.286 kb on + strand, within HP15_149at 151.286 kb on + strand, within HP15_149at 151.341 kb on + strand, within HP15_149at 151.347 kb on + strand, within HP15_149at 151.372 kb on + strand, within HP15_149at 151.380 kb on - strand, within HP15_149at 151.380 kb on - strand, within HP15_149at 151.411 kb on + strandat 151.421 kb on + strandat 151.429 kb on - strandat 151.429 kb on - strandat 151.447 kb on + strandat 151.474 kb on + strandat 151.645 kb on + strand, within HP15_150at 151.673 kb on - strand, within HP15_150at 151.677 kb on + strand, within HP15_150at 151.766 kb on + strandat 151.801 kb on - strandat 151.838 kb on - strandat 151.905 kb on - strand, within HP15_151at 151.912 kb on + strand, within HP15_151at 151.920 kb on - strand, within HP15_151at 152.032 kb on + strand, within HP15_151at 152.104 kb on - strand, within HP15_151at 152.221 kb on + strand, within HP15_151at 152.225 kb on + strand, within HP15_151at 152.251 kb on + strand, within HP15_151at 152.259 kb on - strand, within HP15_151at 152.281 kb on - strand, within HP15_151at 152.311 kb on + strand, within HP15_151at 152.311 kb on + strand, within HP15_151at 152.319 kb on - strand, within HP15_151at 152.319 kb on - strand, within HP15_151at 152.319 kb on - strand, within HP15_151at 152.437 kb on + strand, within HP15_151at 152.452 kb on + strand, within HP15_151at 152.452 kb on + strand, within HP15_151

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycine (N)
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149,748 + HP15_147 0.13 +0.8
149,772 + HP15_147 0.18 -0.6
149,784 + HP15_147 0.20 +0.8
149,792 - HP15_147 0.22 +1.4
149,903 + HP15_147 0.45 +1.5
149,951 - HP15_147 0.55 -0.8
149,973 + HP15_147 0.60 +0.4
149,983 - HP15_147 0.62 +0.4
149,983 - HP15_147 0.62 -0.5
150,003 + HP15_147 0.66 +2.9
150,017 + HP15_147 0.69 +0.1
150,025 - HP15_147 0.71 +0.1
150,205 - -1.3
150,215 - HP15_148 0.11 +0.4
150,338 + HP15_148 0.36 -0.1
150,338 + HP15_148 0.36 -1.2
150,425 - HP15_148 0.53 -0.5
150,524 - HP15_148 0.73 -1.0
150,539 + HP15_148 0.76 -0.7
150,552 - HP15_148 0.79 +1.2
150,579 + HP15_148 0.84 -0.6
150,594 + HP15_148 0.87 +0.3
150,594 + HP15_148 0.87 -0.2
150,602 - HP15_148 0.89 -0.3
150,602 - HP15_148 0.89 -0.5
150,706 + -1.4
150,706 + +0.8
150,706 + -0.2
150,706 + +0.0
150,706 + +0.4
150,714 - +0.3
150,751 - -0.1
150,758 - +0.3
150,848 - HP15_149 0.20 -0.2
150,849 - HP15_149 0.20 -0.1
150,915 + HP15_149 0.28 -0.7
150,943 + HP15_149 0.32 +0.3
150,953 - HP15_149 0.33 +0.6
150,953 - HP15_149 0.33 +0.8
151,014 + HP15_149 0.41 +0.3
151,014 + HP15_149 0.41 +0.5
151,014 + HP15_149 0.41 -0.0
151,022 - HP15_149 0.42 +0.4
151,024 + HP15_149 0.42 +0.5
151,024 + HP15_149 0.42 +0.5
151,024 + HP15_149 0.42 +0.6
151,032 - HP15_149 0.43 -0.4
151,032 - HP15_149 0.43 +0.7
151,032 - HP15_149 0.43 -0.2
151,032 - HP15_149 0.43 +0.7
151,067 - HP15_149 0.47 -0.2
151,148 + HP15_149 0.57 +0.7
151,196 + HP15_149 0.64 +0.1
151,276 + HP15_149 0.74 +1.1
151,276 + HP15_149 0.74 +1.1
151,284 - HP15_149 0.75 +0.6
151,286 + HP15_149 0.75 -0.8
151,286 + HP15_149 0.75 -0.6
151,341 + HP15_149 0.82 +0.4
151,347 + HP15_149 0.83 -0.2
151,372 + HP15_149 0.86 -0.2
151,380 - HP15_149 0.87 -0.2
151,380 - HP15_149 0.87 +0.4
151,411 + +0.2
151,421 + +0.3
151,429 - +1.4
151,429 - +0.4
151,447 + -0.4
151,474 + -0.6
151,645 + HP15_150 0.56 -0.1
151,673 - HP15_150 0.68 -0.3
151,677 + HP15_150 0.69 -0.1
151,766 + -0.6
151,801 - +0.4
151,838 - -0.4
151,905 - HP15_151 0.10 +0.5
151,912 + HP15_151 0.11 -0.6
151,920 - HP15_151 0.11 +0.0
152,032 + HP15_151 0.22 -0.3
152,104 - HP15_151 0.28 -0.8
152,221 + HP15_151 0.39 -0.5
152,225 + HP15_151 0.39 +0.1
152,251 + HP15_151 0.42 +0.1
152,259 - HP15_151 0.43 +0.4
152,281 - HP15_151 0.45 +0.1
152,311 + HP15_151 0.47 -0.9
152,311 + HP15_151 0.47 -0.7
152,319 - HP15_151 0.48 -1.5
152,319 - HP15_151 0.48 -0.3
152,319 - HP15_151 0.48 -0.1
152,437 + HP15_151 0.59 -0.2
152,452 + HP15_151 0.60 -1.0
152,452 + HP15_151 0.60 +2.3

Or see this region's nucleotide sequence