Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0507
Experiment: Formate/Acetate-Sulfite (10/60-20 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (10/60-20 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 578,654 | - | -0.4 | |||
| 578,729 | - | -0.7 | |||
| 578,781 | - | DVU0506 | 0.15 | -0.3 | |
| 578,846 | + | DVU0506 | 0.21 | -1.6 | |
| 578,936 | - | DVU0506 | 0.30 | -0.2 | |
| 579,160 | + | DVU0506 | 0.53 | -0.1 | |
| 579,224 | + | DVU0506 | 0.59 | -0.3 | |
| 579,372 | + | DVU0506 | 0.74 | -0.8 | |
| 579,372 | + | DVU0506 | 0.74 | +0.2 | |
| 579,388 | + | DVU0506 | 0.76 | -0.6 | |
| 579,429 | - | DVU0506 | 0.80 | -1.5 | |
| 579,429 | - | DVU0506 | 0.80 | +0.0 | |
| 579,429 | - | DVU0506 | 0.80 | -0.6 | |
| 579,677 | + | +0.9 | |||
| 579,717 | - | DVU0507 | 0.23 | +0.3 | |
| 579,737 | + | DVU0507 | 0.30 | -0.2 | |
| 579,853 | + | DVU0507 | 0.70 | +2.7 | |
| 579,921 | - | -0.8 | |||
| 579,966 | - | +0.1 | |||
| 580,013 | - | -0.5 | |||
| 580,044 | + | -1.2 | |||
| 580,044 | + | +0.3 |
Or see this region's nucleotide sequence