Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3360

Experiment: Formate/Acetate-Sulfite (10/60-20 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (10/60-20 mM)
3,529,488	-	parA	DVU3358	0.40	+0.5
3,529,488	-	parA	DVU3358	0.40	+0.4
3,529,488	-	parA	DVU3358	0.40	-0.7
3,529,529	+	parA	DVU3358	0.45	+0.2
3,529,537	-	parA	DVU3358	0.46	+0.5
3,529,563	+	parA	DVU3358	0.49	-1.2
3,529,563	+	parA	DVU3358	0.49	-0.8
3,529,563	+	parA	DVU3358	0.49	-0.2
3,529,582	+	parA	DVU3358	0.51	-0.0
3,529,590	-	parA	DVU3358	0.52	-1.1
3,529,590	-	parA	DVU3358	0.52	-0.5
3,529,628	+	parA	DVU3358	0.57	+0.1
3,529,687	+	parA	DVU3358	0.64	+0.9
3,529,687	+	parA	DVU3358	0.64	-0.2
3,529,730	+	parA	DVU3358	0.69	-0.3
3,529,758	-	parA	DVU3358	0.73	-1.5
3,529,858	-	parA	DVU3358	0.85	-0.6
3,529,957	-				-0.5
3,529,985	-				+0.5
3,529,988	-				-1.8
3,530,449	+				+0.3
3,530,471	+				-0.4
3,530,482	+				+0.0
3,530,490	-				-0.6
3,530,490	-				-0.9
3,530,519	-				+0.4
3,530,617	+	parB	DVU3360	0.14	+0.1
3,530,664	+	parB	DVU3360	0.19	+0.4
3,530,700	-	parB	DVU3360	0.23	+0.8
3,530,786	+	parB	DVU3360	0.33	-0.3
3,530,856	-	parB	DVU3360	0.40	-0.6
3,530,861	+	parB	DVU3360	0.41	+0.4
3,530,861	+	parB	DVU3360	0.41	+0.1
3,530,871	-	parB	DVU3360	0.42	+0.5
3,530,899	-	parB	DVU3360	0.45	+0.5
3,530,922	+	parB	DVU3360	0.48	-0.3
3,530,963	+	parB	DVU3360	0.52	+1.8
3,530,968	+	parB	DVU3360	0.53	-0.1
3,530,968	+	parB	DVU3360	0.53	-0.1
3,530,968	+	parB	DVU3360	0.53	+0.5
3,530,968	+	parB	DVU3360	0.53	+0.3
3,530,976	-	parB	DVU3360	0.54	-0.6
3,530,976	-	parB	DVU3360	0.54	-0.9
3,531,056	-	parB	DVU3360	0.62	-0.0
3,531,069	-	parB	DVU3360	0.64	+0.6
3,531,080	+	parB	DVU3360	0.65	+0.7
3,531,080	+	parB	DVU3360	0.65	-0.2
3,531,088	-	parB	DVU3360	0.66	+0.5
3,531,088	-	parB	DVU3360	0.66	+0.9
3,531,149	+	parB	DVU3360	0.72	-0.0
3,531,220	+	parB	DVU3360	0.80	+0.2
3,531,296	+	parB	DVU3360	0.89	+0.1
3,531,298	-	parB	DVU3360	0.89	+0.4
3,531,309	+				+0.4
3,531,317	-				+0.1
3,531,394	+				+1.2