Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0930
Experiment: Formate/Acetate-Sulfite (10/60-20 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (10/60-20 mM) |
---|---|---|---|---|---|
remove | |||||
1,019,627 | - | +0.4 | |||
1,019,749 | - | -0.9 | |||
1,019,975 | + | proB | DVU0930 | 0.23 | -1.5 |
1,019,975 | + | proB | DVU0930 | 0.23 | +0.3 |
1,019,983 | - | proB | DVU0930 | 0.24 | -2.9 |
1,020,305 | - | proB | DVU0930 | 0.52 | -1.9 |
1,020,333 | + | proB | DVU0930 | 0.54 | -1.9 |
1,020,353 | + | proB | DVU0930 | 0.56 | -1.8 |
1,020,411 | + | proB | DVU0930 | 0.61 | -1.5 |
1,020,424 | - | proB | DVU0930 | 0.62 | +0.6 |
1,020,598 | - | proB | DVU0930 | 0.77 | -0.7 |
1,020,668 | - | proB | DVU0930 | 0.83 | -2.0 |
1,020,741 | + | proB | DVU0930 | 0.90 | -2.7 |
1,020,754 | + | -1.6 | |||
1,020,884 | + | +0.5 | |||
1,020,899 | - | +0.6 | |||
1,020,904 | + | -1.0 | |||
1,020,907 | - | -1.1 | |||
1,020,912 | - | -0.5 | |||
1,021,779 | - | +0.3 | |||
1,021,782 | + | +0.1 | |||
1,021,822 | + | +0.4 |
Or see this region's nucleotide sequence