Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5305

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
6,097,419	+				-0.2
6,097,420	-				-0.1
6,097,420	-				-0.5
6,097,429	+				+0.1
6,097,429	+				-0.7
6,097,429	+				-0.7
6,097,429	+				+1.0
6,097,430	-				-0.1
6,097,430	-				+0.9
6,097,430	-				+1.8
6,097,529	+				-1.2
6,097,573	-				+0.6
6,097,637	+				+0.7
6,097,638	-				+0.0
6,097,651	+				-1.8
6,097,651	+				-0.1
6,097,651	+				-0.2
6,097,651	+				-0.2
6,097,651	+				+0.1
6,097,652	-				+1.9
6,097,700	+				+0.6
6,097,744	+				-1.2
6,097,745	-				+0.1
6,097,753	+				-0.3
6,097,765	+				+0.2
6,097,765	+				+0.4
6,097,765	+				+0.2
6,097,766	-				-0.0
6,097,766	-				+0.4
6,097,795	+				+0.5
6,097,796	-				-0.7
6,097,796	-				+0.5
6,097,831	+		Pf6N2E2_5304	0.16	-0.7
6,097,831	+		Pf6N2E2_5304	0.16	+0.1
6,097,831	+		Pf6N2E2_5304	0.16	-0.3
6,097,831	+		Pf6N2E2_5304	0.16	-1.4
6,097,831	+		Pf6N2E2_5304	0.16	+0.4
6,097,831	+		Pf6N2E2_5304	0.16	-0.2
6,097,831	+		Pf6N2E2_5304	0.16	-0.9
6,097,831	+		Pf6N2E2_5304	0.16	+0.5
6,097,831	+		Pf6N2E2_5304	0.16	+0.5
6,097,832	-		Pf6N2E2_5304	0.16	+0.3
6,097,832	-		Pf6N2E2_5304	0.16	-0.2
6,097,832	-		Pf6N2E2_5304	0.16	-0.7
6,097,832	-		Pf6N2E2_5304	0.16	-0.8
6,097,832	-		Pf6N2E2_5304	0.16	+0.5
6,097,832	-		Pf6N2E2_5304	0.16	+0.3
6,097,832	-		Pf6N2E2_5304	0.16	+1.0
6,097,832	-		Pf6N2E2_5304	0.16	+1.3
6,097,832	-		Pf6N2E2_5304	0.16	+1.3
6,097,832	-		Pf6N2E2_5304	0.16	+0.1
6,097,834	+		Pf6N2E2_5304	0.17	+0.3
6,097,834	+		Pf6N2E2_5304	0.17	+0.3
6,097,835	-		Pf6N2E2_5304	0.17	+0.6
6,097,835	-		Pf6N2E2_5304	0.17	+0.5
6,097,835	-		Pf6N2E2_5304	0.17	-0.8
6,098,283	+				-2.0
6,098,283	+				-0.7
6,098,283	+				-1.0
6,098,283	+				-1.5
6,098,283	+				-1.5
6,098,284	-				-1.7
6,098,284	-				-2.9
6,098,284	-				-2.5
6,098,284	-				-2.2
6,098,284	-				-0.8
6,098,284	-				-2.8
6,098,284	-				-1.1
6,098,284	-				-2.0
6,098,307	+				-1.0
6,098,307	+				-2.9
6,098,307	+				-1.9
6,098,308	-				-1.0
6,098,308	-				-2.5
6,098,308	-				-2.3
6,098,308	-				-2.3
6,098,308	-				-1.8
6,098,308	-				-0.9
6,098,346	+				-0.9
6,098,346	+				-2.0
6,098,346	+				-1.0
6,098,346	+				-1.7
6,098,346	+				+0.8
6,098,347	-				-1.9
6,098,347	-				-2.1
6,098,347	-				-0.7
6,098,442	+				-1.0
6,098,462	-				-2.5
6,098,521	-		Pf6N2E2_5305	0.11	-3.2
6,098,521	-		Pf6N2E2_5305	0.11	-2.8
6,098,521	-		Pf6N2E2_5305	0.11	-1.0
6,098,521	-		Pf6N2E2_5305	0.11	-0.4
6,098,557	+		Pf6N2E2_5305	0.13	-2.4
6,098,557	+		Pf6N2E2_5305	0.13	-1.2
6,098,557	+		Pf6N2E2_5305	0.13	-1.5
6,098,557	+		Pf6N2E2_5305	0.13	-0.5
6,098,557	+		Pf6N2E2_5305	0.13	-0.9
6,098,557	+		Pf6N2E2_5305	0.13	-1.4
6,098,557	+		Pf6N2E2_5305	0.13	-0.0
6,098,557	+		Pf6N2E2_5305	0.13	-1.5
6,098,557	+		Pf6N2E2_5305	0.13	-3.4
6,098,557	+		Pf6N2E2_5305	0.13	-1.2
6,098,558	-		Pf6N2E2_5305	0.13	-1.2
6,098,558	-		Pf6N2E2_5305	0.13	-1.9
6,098,558	-		Pf6N2E2_5305	0.13	-1.6
6,098,558	-		Pf6N2E2_5305	0.13	-2.1
6,098,558	-		Pf6N2E2_5305	0.13	-2.2
6,098,559	+		Pf6N2E2_5305	0.13	-2.0
6,098,560	-		Pf6N2E2_5305	0.13	-0.9
6,098,655	+		Pf6N2E2_5305	0.17	-2.4
6,098,655	+		Pf6N2E2_5305	0.17	-0.8
6,098,655	+		Pf6N2E2_5305	0.17	-3.2
6,098,655	+		Pf6N2E2_5305	0.17	-2.2
6,098,655	+		Pf6N2E2_5305	0.17	-0.5
6,098,655	+		Pf6N2E2_5305	0.17	-1.0
6,098,656	-		Pf6N2E2_5305	0.17	-2.1
6,098,656	-		Pf6N2E2_5305	0.17	-1.9
6,098,656	-		Pf6N2E2_5305	0.17	-1.5
6,098,656	-		Pf6N2E2_5305	0.17	+0.1
6,098,656	-		Pf6N2E2_5305	0.17	-1.2
6,098,656	-		Pf6N2E2_5305	0.17	+0.0
6,098,656	-		Pf6N2E2_5305	0.17	-1.5
6,098,656	-		Pf6N2E2_5305	0.17	-1.0
6,098,664	+		Pf6N2E2_5305	0.17	-1.9
6,098,664	+		Pf6N2E2_5305	0.17	-0.8
6,098,664	+		Pf6N2E2_5305	0.17	-1.2
6,098,664	+		Pf6N2E2_5305	0.17	-1.6
6,098,664	+		Pf6N2E2_5305	0.17	-0.2
6,098,664	+		Pf6N2E2_5305	0.17	+0.3
6,098,664	+		Pf6N2E2_5305	0.17	-0.3
6,098,664	+		Pf6N2E2_5305	0.17	-1.5
6,098,665	-		Pf6N2E2_5305	0.17	-2.6
6,098,709	+		Pf6N2E2_5305	0.19	-1.5
6,098,709	+		Pf6N2E2_5305	0.19	-1.0
6,098,710	-		Pf6N2E2_5305	0.19	-0.8
6,098,710	-		Pf6N2E2_5305	0.19	-3.3
6,098,710	-		Pf6N2E2_5305	0.19	-0.8
6,098,710	-		Pf6N2E2_5305	0.19	-1.4
6,098,710	-		Pf6N2E2_5305	0.19	+1.7
6,098,787	+		Pf6N2E2_5305	0.23	-1.9
6,098,788	-		Pf6N2E2_5305	0.23	-0.7
6,098,788	-		Pf6N2E2_5305	0.23	-2.0
6,098,925	+		Pf6N2E2_5305	0.29	-1.2
6,098,962	-		Pf6N2E2_5305	0.30	-2.4
6,098,962	-		Pf6N2E2_5305	0.30	-1.0
6,098,989	-		Pf6N2E2_5305	0.31	-1.2
6,098,989	-		Pf6N2E2_5305	0.31	-2.2
6,099,021	+		Pf6N2E2_5305	0.33	-0.8
6,099,021	+		Pf6N2E2_5305	0.33	-1.0
6,099,021	+		Pf6N2E2_5305	0.33	-1.3
6,099,021	+		Pf6N2E2_5305	0.33	-0.9
6,099,021	+		Pf6N2E2_5305	0.33	-2.1
6,099,022	-		Pf6N2E2_5305	0.33	-2.3
6,099,022	-		Pf6N2E2_5305	0.33	-2.9
6,099,022	-		Pf6N2E2_5305	0.33	-1.1
6,099,033	+		Pf6N2E2_5305	0.33	-1.2
6,099,033	+		Pf6N2E2_5305	0.33	-1.8
6,099,034	-		Pf6N2E2_5305	0.33	-2.7
6,099,034	-		Pf6N2E2_5305	0.33	-2.1
6,099,034	-		Pf6N2E2_5305	0.33	-1.1
6,099,255	+		Pf6N2E2_5305	0.43	-2.3
6,099,255	+		Pf6N2E2_5305	0.43	-1.7
6,099,255	+		Pf6N2E2_5305	0.43	-0.2
6,099,256	-		Pf6N2E2_5305	0.43	-2.0
6,099,256	-		Pf6N2E2_5305	0.43	-2.4
6,099,256	-		Pf6N2E2_5305	0.43	-2.2
6,099,445	-		Pf6N2E2_5305	0.51	-1.2
6,099,525	+		Pf6N2E2_5305	0.54	-1.1
6,099,525	+		Pf6N2E2_5305	0.54	-1.8
6,099,526	-		Pf6N2E2_5305	0.54	-0.4
6,099,570	+		Pf6N2E2_5305	0.56	-0.9
6,099,571	-		Pf6N2E2_5305	0.56	-1.8
6,099,571	-		Pf6N2E2_5305	0.56	+0.3
6,099,615	+		Pf6N2E2_5305	0.58	-2.4
6,099,615	+		Pf6N2E2_5305	0.58	-1.8
6,099,690	+		Pf6N2E2_5305	0.61	-2.6
6,099,806	+		Pf6N2E2_5305	0.66	-1.7
6,099,806	+		Pf6N2E2_5305	0.66	-1.4
6,099,807	-		Pf6N2E2_5305	0.66	-2.1
6,099,807	-		Pf6N2E2_5305	0.66	-1.0
6,099,905	+		Pf6N2E2_5305	0.70	-3.4
6,099,905	+		Pf6N2E2_5305	0.70	-1.7
6,099,905	+		Pf6N2E2_5305	0.70	-2.0
6,099,905	+		Pf6N2E2_5305	0.70	-1.7
6,099,906	-		Pf6N2E2_5305	0.70	-2.9
6,099,919	+		Pf6N2E2_5305	0.71	-2.5
6,099,920	-		Pf6N2E2_5305	0.71	-1.5
6,099,961	-		Pf6N2E2_5305	0.73	-1.1
6,100,064	-		Pf6N2E2_5305	0.77	-3.2
6,100,288	+		Pf6N2E2_5305	0.87	-1.9
6,100,288	+		Pf6N2E2_5305	0.87	-2.4
6,100,288	+		Pf6N2E2_5305	0.87	-3.2
6,100,288	+		Pf6N2E2_5305	0.87	-1.4
6,100,289	-		Pf6N2E2_5305	0.87	-2.8
6,100,289	-		Pf6N2E2_5305	0.87	-1.0
6,100,356	+		Pf6N2E2_5305	0.90	-1.4
6,100,356	+		Pf6N2E2_5305	0.90	-1.1
6,100,356	+		Pf6N2E2_5305	0.90	-2.4
6,100,357	-		Pf6N2E2_5305	0.90	-2.2
6,100,357	-		Pf6N2E2_5305	0.90	-2.6
6,100,479	+				-1.8
6,100,480	-				-2.4
6,100,503	-				-0.3
6,100,503	-				-0.3
6,100,583	-				-0.3
6,100,583	-				-0.9
6,100,583	-				+0.2
6,100,621	+				-2.6
6,100,752	+				+0.2
6,100,753	-				+2.3
6,100,753	-				-1.7
6,100,920	+		Pf6N2E2_5306	0.22	+1.3
6,100,920	+		Pf6N2E2_5306	0.22	-0.8
6,100,920	+		Pf6N2E2_5306	0.22	-0.3
6,100,921	-		Pf6N2E2_5306	0.22	-0.0
6,100,921	-		Pf6N2E2_5306	0.22	-1.0
6,101,100	+		Pf6N2E2_5306	0.41	-3.0
6,101,100	+		Pf6N2E2_5306	0.41	+0.4
6,101,100	+		Pf6N2E2_5306	0.41	-1.4
6,101,100	+		Pf6N2E2_5306	0.41	-1.3
6,101,100	+		Pf6N2E2_5306	0.41	-0.9
6,101,101	-		Pf6N2E2_5306	0.41	-0.8
6,101,148	+		Pf6N2E2_5306	0.46	-1.7
6,101,149	-		Pf6N2E2_5306	0.46	+0.1
6,101,149	-		Pf6N2E2_5306	0.46	-0.7
6,101,149	-		Pf6N2E2_5306	0.46	+0.2
6,101,149	-		Pf6N2E2_5306	0.46	-0.7
6,101,149	-		Pf6N2E2_5306	0.46	+0.1
6,101,152	+		Pf6N2E2_5306	0.46	-0.3
6,101,152	+		Pf6N2E2_5306	0.46	-1.1
6,101,152	+		Pf6N2E2_5306	0.46	-1.7
6,101,152	+		Pf6N2E2_5306	0.46	-1.4
6,101,152	+		Pf6N2E2_5306	0.46	-0.6
6,101,152	+		Pf6N2E2_5306	0.46	-0.9
6,101,152	+		Pf6N2E2_5306	0.46	+0.1
6,101,152	+		Pf6N2E2_5306	0.46	-1.8
6,101,153	-		Pf6N2E2_5306	0.46	-2.0
6,101,391	+		Pf6N2E2_5306	0.71	+0.7
6,101,470	-		Pf6N2E2_5306	0.79	+0.7
6,101,474	+		Pf6N2E2_5306	0.80	-0.7
6,101,501	+		Pf6N2E2_5306	0.83	+0.1
6,101,502	-		Pf6N2E2_5306	0.83	-1.4
6,101,502	-		Pf6N2E2_5306	0.83	+0.4
6,101,502	-		Pf6N2E2_5306	0.83	-0.7
6,101,589	+				-2.4
6,101,589	+				-0.4
6,101,590	-				+1.5
6,101,590	-				-2.7